KEGG   Erigeron canadensis (horseweed): 122600316
Entry
122600316         CDS       T07610                                 
Name
(RefSeq) polyubiquitin 9
  KO
K03873  elongin-B
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122600316
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ecad04121]
    122600316
   03400 DNA repair and recombination proteins [BR:ecad03400]
    122600316
Ubiquitin system [BR:ecad04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Adoptor protein
     122600316
   Cul5 complex
     122600316
DNA repair and recombination proteins [BR:ecad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     122600316
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Dsc3_N Ubiquitin_5 Chal_sti_synt_N
Other DBs
NCBI-GeneID: 122600316
NCBI-ProteinID: XP_043628959
LinkDB
Position
5:complement(4932976..4935303)
AA seq 104 aa
MAMYIRVKRNKTTYFLQCDATEKILDIKEKLHNLIDQPVNDQRLILVATGEVLDDSKTLA
DQKVENDAVVALVLRKDDNEFEDVNIVRPDDFYQSRDADATGNW
NT seq 315 nt   +upstreamnt  +downstreamnt
atggctatgtacattcgtgttaagcgtaataagacgacttactttttgcaatgtgatgca
actgagaaaattttagatattaaggaaaagttgcataacctcatcgatcagcccgttaat
gatcagcgtttaattttagtcgcgaccggagaagtcttggatgattcaaagacattggct
gatcaaaaggttgaaaatgatgctgttgtggcacttgtgttgagaaaagatgacaacgaa
tttgaggatgtgaacatagtgagaccagatgatttttatcagtctcgtgatgcagacgct
actggtaattggtaa

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