Erigeron canadensis (horseweed): 122600501
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Entry
122600501 CDS
T07610
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial-like
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00280
Valine, leucine and isoleucine degradation
ecad00650
Butanoate metabolism
ecad01100
Metabolic pathways
ecad04146
Peroxisome
Module
ecad_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
122600501
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
122600501
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122600501
Enzymes [BR:
ecad01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
122600501
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GFIT
Motif
Pfam:
HMGL-like
Comm
Motif
Other DBs
NCBI-GeneID:
122600501
NCBI-ProteinID:
XP_043629160
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Position
5:42435830..42439448
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AA seq
414 aa
AA seq
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MSSLEEPIGWLDNLPSLSNIDHTSRRFSSKRCSTSGDDNNIINNNGLGFCWIEGITRGSS
NSYKEDYSKENRRETFIWRNHKREIIHNDNRCQVANVRNTLYSNDTGPKDITHTIFRGMP
SYVKIVEVGPRDGLQNEKNTVPTSVKIELIHRLVSCGLSVVEATSFVSPKWVPQLADAKD
VMKAVKDLEGAILPVLTPNLKGFEAAYAAGAKEIAVFASASESFSKANINCTVEESLVRY
RDVVNAATKLSIPVRGYVSCVIGCPVEGAINPLKVAYVAKQLHEMGCREISLGDTIGIGT
PGTVIPMLQAVMEVVPVEKLAVHFHDTYGQSLPNILVSLQMGISIVDSSVAGLGGCPYAK
GASGNVATEDVVYMLNGLGIKTNVDMTKLLQTGEFICKYLGRTSGSKVAVASKT
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttggaggagccaattggttggttggacaacttacccagccttagcaatatt
gatcatacttccagaaggttttcctctaaacgttgtagcactagtggagacgacaataat
attattaataataatggattgggattttgctggattgaaggaattacccgaggatcctcc
aatagctataaggaagattatagtaaagaaaaccggcgagaaactttcatttggagaaac
cataaaagagagatcatacacaatgataatcggtgtcaagtagcaaacgttaggaacacg
ttgtatagcaatgatacgggcccaaaggacataactcatacgatttttagaggtatgcca
agttatgtgaagatagtggaagttggtccgagggacgggttacaaaatgagaagaatacc
gtacctacctctgttaagatagaattgattcataggcttgtttcttgtggattatctgtt
gttgaggccacaagttttgtttctcctaaatgggtacctcagctggctgatgctaaggat
gttatgaaagcggttaaagacttggaaggtgcaatattaccagtgttgacaccgaatttg
aagggttttgaagctgcatatgctgctggagcaaaggaaatagccgtttttgcttcagct
tccgagtctttctcaaaggcaaacattaactgtactgttgaagaaagtcttgttcgttac
cgtgatgttgttaatgctgcaacaaagctctctattcctgttcgtgggtatgtatcatgt
gtgattggttgtccagttgaaggggcaattaatccattgaaagttgcatatgttgcgaaa
caacttcacgaaatgggttgcagggaaatctcacttggtgatacaatagggattggtaca
ccagggactgtaattcctatgcttcaagcagtcatggaagttgtgcctgttgaaaagctt
gcggttcactttcacgatacttatggccaatctcttccaaacattttagtatccctccaa
atgggaataagcattgtggattcttctgtagcgggactaggagggtgtccatatgctaag
ggagcttctggcaatgtcgccactgaagatgtagtgtacatgcttaacgggcttggtatc
aaaacaaatgttgatatgacaaagctcttgcaaacgggtgagttcatttgtaaatatttg
ggccgcacatctggctcaaaggttgctgttgcctccaaaacataa
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