Erigeron canadensis (horseweed): 122600504
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Entry
122600504 CDS
T07610
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1-like
KO
K27807
short internodes/stylish family transcription factor
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122600504
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
122600504
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GFIT
Motif
Pfam:
DUF702
SOSSC
MCM_bind
Motif
Other DBs
NCBI-GeneID:
122600504
NCBI-ProteinID:
XP_043629164
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All DBs
Position
5:complement(42396029..42397524)
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AA seq
338 aa
AA seq
DB search
MWSSAASRQINYGGPTEMGMFVLAQSNPNHHHISSDHHHHVHAHSLNTTTAAGTTALGVG
VIPLLTATPLTAGEEGIIGNRSNNSNIQFWQPTQQSYVKKINMFSDHGFGGIGGSTSGST
LTCQDCGNQAKKDCNHRRCRTCCRNRGFDCPTHVKSTWVPAARRRERQLIASGSSASTSG
TKKPRLATNSRTTTTSHTSTSNNNNNNTPPRSFDTSTSSHHQDASFMQSLPGQVHAPAVF
KCVRVTAVEDGGEDEYAYQASVKIGGHVFKGFLYDQGIVVETSSSRDHINISNFSELHLG
GGGGGGSGRNVGGSLTSPPSLDTPTVVYGSSSGGGLIG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcatcagccgcttcaaggcaaatcaactatggaggacctactgaaatgggaatg
tttgttcttgcacaatcaaaccccaaccaccatcatatatcatctgatcatcatcatcat
gtgcatgctcactctcttaacacaaccaccgccgccggtacgacggcgttaggtgttggt
gttataccgcttttaaccgccacccctctcacggcgggggaagagggtattataggaaac
cgtagtaataatagtaatattcagttttggcaacccacacaacaaagttatgtaaagaaa
ataaacatgttttcggatcatggttttggtgggataggcgggtcaacgtctgggtcaacg
ctgacttgtcaagattgtgggaaccaagccaagaaagattgtaaccatagaaggtgtaga
acttgttgtaggaatagaggttttgattgtcctactcacgtgaaaagcacgtgggttccg
gcagctcgtcggagggaacgtcagttgatagcctccggttcatcggcgtctacctccggt
accaagaaacctagacttgctactaattctcggaccacaaccacttcacatacttcaact
tcaaataataataataataatacacctccaagaagctttgacactagtacttctagtcat
caccaagatgcaagttttatgcaatcattgccgggtcaagtgcatgctccggcggtgttc
aagtgtgtgagagtgacggcggtggaagacggcggagaggacgaatacgcataccaagca
agtgtaaaaattggtgggcatgtgttcaaagggtttctatatgatcaaggtattgttgtt
gaaacaagtagtagtagagaccacatcaacatttctaatttttctgaattgcatttgggt
ggtggtggtggtggtggctcagggcggaatgtgggtggttcgttaacatctcctccatca
ctagatacaccaacggtggtttatggttcttcatctggtggtggattaattggttga
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