KEGG   Erigeron canadensis (horseweed): 122600549
Entry
122600549         CDS       T07610                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
ecad  Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecad03400]
    122600549
DNA repair and recombination proteins [BR:ecad03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    122600549
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 DEAD zf-C3HC4_4 Prok-RING_4 RING_XB3-XBAT31 zf-RING_5 ResIII zf-RING_4 UBA_Rad5 zf-ANAPC11 Endonuc-BsobI NifU_N
Other DBs
NCBI-GeneID: 122600549
NCBI-ProteinID: XP_043629219
LinkDB
Position
1:complement(56906838..56914406)
AA seq 1032 aa
MANKIPDELISTVRSIVGQDYSKMDVLRALHMAKNDPTAAINIIFDTPTFKKSQPPKPLK
GLNHNPAVDKPRDSVPVPVRVSEPVDSVVSSSVKVNEPSVGRTVECNVEKGNDVVRSSKW
WFVGCSEMMASSTCKGDKIKEGDRVDFTFPLNKSKVASVGGRGKPLNSCSEIVRFSTLAS
GEIGRIPNEWSRCLLPLVRDKKVEIEGFCKSTPGNLGLMDTIKLSVSVYINSSILHKSHQ
TSLKVPTSSNDETSIHTLPTLFRLLGLVPFKKAEFSPSDLNTKKRPLDVKDGSGVSARLI
NAGKNKNSPSNGSTAENEETISDNDLDNIVGVANGSELEEMEPPSALLCDLRPYQKQALH
WMVHLEKRLSTDEAATTLHPCWDAYHLADKRNFVVYVNSFSGEATVDFPSTLQMARGGIL
ADAMGLGKTIMTISLLLAHTEKGGALDKDSASQACTEGDEMLNGLDQSPSSLKKVPKFSG
FDKFRKQKQSLIGGGNLIICPMTLIGQWKAEIETHGEPGALSIYVHYGQSRPKDAKILAH
NDVVLTTYGVVASEFSSENAEERGGLFSVRWFRVVLDEAHTIKSSKSQISMAVATLVADR
RWCLTGTPIQNSLEDIYSLLRFLRIEPWGSWAWWNKLIQKPFEAGDVRGLSLVQNILRPI
MLRRTKFSTDKEGRPILVLPPAEMQVIYCEQTEAEKDFYDALFKRSKVKFDQFIEQGRVL
HNYASILELLLRLRQCCDHPFLVMSRGDTQDFSDLGKLAKRFLKGGKDAIEEGKEAPSKA
YIQEVVKELQKGEEGECPICLEAFEDAVLTPCAHRLCRECLLSSWRTPNSGLCPVCRNAV
SKQELITAPTDSRFRVDVEKNWVESSKVSALLRELESLRPSGSKSIVFSQWTAFLDLLQI
PLSRNNISFVRLDGTLNQQQREKVITQFSEESDIMVLLMSLKAGGVGINLTAASNAFVLD
PWWNPAVEEQAVMRIHRIGQTKSVHIKRFIVKGTVEERMEAVQARKQRLISGALTDQEVR
TARIEELKMLFT
NT seq 3099 nt   +upstreamnt  +downstreamnt
atggcaaacaaaatccccgacgaactaatctcaaccgtccgatcaatcgtgggccaagat
tactccaaaatggatgtactcagagcccttcatatggccaagaatgatccaactgctgca
attaacataatttttgacaccccaactttcaaaaaatcacaacccccaaaacccttaaag
ggtctgaatcataatccagctgtcgataaaccccgtgattcggttccggttccggtccgg
gtttctgaaccggtagatagtgtagttagtagtagtgtaaaggtcaatgagccaagtgtt
ggtaggacagttgagtgtaatgtggagaaaggaaacgatgtcgttaggagtagtaagtgg
tggtttgtgggttgttctgaaatgatggcgtcatcgacttgtaaaggtgataagattaag
gagggtgatcgggttgattttacatttcctttgaataaatcgaaggtagctagtgtcggt
ggtcgtggtaagcctttgaattcgtgttcggagattgtgaggttttctacattagcttct
ggggagatcggtcggatcccaaacgaatggtcacgatgtcttttgcctcttgttagagat
aagaaggtcgagatagaaggtttttgcaaatctactcctggtaatctgggacttatggat
accattaagctttctgtcagtgtttacataaatagttccatattacacaagagccatcag
acctctctcaaggtgccaactagttccaatgatgaaacctccatccacaccctcccaacc
ttgttccggttacttggattagttcctttcaaaaaggcagaattttcacctagtgactta
aatacaaagaagcgacctttggatgtaaaggatggttctggtgtttctgctcggttaatc
aatgctggcaaaaataaaaactcaccttcaaatggaagtacagctgaaaatgaggagaca
atctcagataatgatcttgacaatattgttggtgttgcaaatggttctgagttagaggaa
atggaacctccaagtgctcttttatgtgatcttcgcccttatcagaagcaggcacttcat
tggatggttcatttggagaagagactatccactgatgaagctgccacaactcttcatccg
tgctgggatgcttatcaccttgcagacaagagaaatttcgtagtctatgtgaactcattt
tcaggagaagctactgtagattttcccagtactctacaaatggcaagaggaggaatattg
gcagatgctatggggcttggaaagactatcatgacgatatcactgctccttgctcacaca
gaaaaaggtggagcattagataaagactccgccagtcaggcatgcactgaaggtgatgaa
atgctaaatggcttggatcagtctccatcatctttaaaaaaagtacccaaattttctgga
tttgataagtttagaaagcagaaacagtccctcattggtggcgggaatctgatcatatgt
cctatgactcttataggccaatggaaggcagagattgaaactcatggggagccaggggct
ttgtctatttatgtccactatgggcaaagtcgcccaaaagatgccaaaatattagctcat
aacgatgttgtgcttaccacctatggagttgtagcctctgaattttcttctgagaatgct
gaagaacgtggtgggcttttttctgtgagatggtttagggtggtgcttgatgaggcacat
accataaaatcttctaaaagccagatttctatggctgtagctacccttgttgctgatcgt
cgatggtgtcttactggtacccctatccaaaacagtttggaggacatttatagtcttctt
cggttcttaagaattgaaccatggggaagctgggcatggtggaacaagctaattcagaaa
cctttcgaggctggtgatgtgaggggattaagcttggttcaaaacatattaaggccaatt
atgctaagaagaaccaagttcagcacagacaaggaaggcaggcctatattagttctcccc
cctgctgagatgcaagtaatatattgcgaacaaacagaggccgaaaaagatttttatgat
gctctttttaagagatctaaggtaaaatttgaccaatttatcgagcaaggacgggttctt
cataactatgcttctattttagagttacttttgcgacttcggcaatgctgtgatcaccct
tttcttgtgatgagtcgaggtgatacgcaagatttttcagatttaggtaaattggcgaaa
cgttttcttaagggtggtaaagacgccattgaagaaggaaaagaagcaccttctaaagct
tatatacaggaggttgtaaaagagttgcaaaagggggaagaaggagaatgtcctatatgc
ctagaagcttttgaagatgcagttttgacaccatgtgctcatcgattatgccgtgaatgt
ctattatcaagttggagaacccccaattcgggtctttgtcctgtttgtagaaatgcggta
agcaagcaggaacttattacagcaccaactgacagtcggtttcgtgtggatgttgagaaa
aactgggtggaatcatcaaaagtgtctgcattgttacgtgaattagaaagtcttcgccca
tcgggttctaaaagtattgtttttagtcagtggactgcctttttggatcttttacagatt
cctctttctagaaacaatatttcatttgttcgtctggatggcactttaaaccagcagcag
cgcgagaaagttataacacaattttcagaagaaagcgatattatggttttattgatgtca
ttgaaggccggaggagttggaattaacctgacagcagcatctaatgcatttgtcttggat
ccttggtggaatcctgctgtcgaggaacaagcggtcatgcgcatccataggattggacaa
actaaaagtgttcatattaaacgctttattgtgaagggtacagtcgaggaaagaatggag
gcagtacaagcacgtaaacaacggctgatctctggcgccttaaccgaccaggaggtccga
actgcaagaattgaggagcttaagatgctattcacttga

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