Erigeron canadensis (horseweed): 122600555
Help
Entry
122600555 CDS
T07610
Name
(RefSeq) syntaxin-related protein KNOLLE
KO
K08486
syntaxin 1B/2/3
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122600555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122600555
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122600555
Membrane trafficking [BR:
ecad04131
]
SNARE
Syntaxin (Qa)
Stx-PM
122600555
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
122600555
Exosomal proteins of other body fluids (saliva and urine)
122600555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
LarA_C
T2SSF
Piezo_THU9_anchor
Synaptobrevin
DUF4363
GP41
Motif
Other DBs
NCBI-GeneID:
122600555
NCBI-ProteinID:
XP_043629225
LinkDB
All DBs
Position
5:complement(43484482..43486258)
Genome browser
AA seq
311 aa
AA seq
DB search
MNDLMTKSFTSYVDLKKSTMKDIDLEAGDLEMHHPDQNLTSFLQEAELVKQEMNSIRDTL
TRLESANQESKSLHNPESLKSNRRKINGEIMNVLKKAKTIKSRLEEMDRANAESRRLSGC
KMGTPIDRTRTAVANGLRKKLKELMMDFQVLRQRMMTEYKETVGRRYFTVTGEEANEEVI
EKIISSGSDGQGGEEFLSRAIQEHGRGKVLETVVEIQDRHDAAKEIETSLLELHQVFLDM
AVMVEAQGEKMDNIEDHVMNAAHYVNAGTKNLKTAKGYQRSSRKCMCIGIILLLIIILVI
VIPIVTSISKS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatcttatgacaaaatcattcaccagctacgtcgatttaaagaaatcgacaatg
aaagacatcgatttagaagccggtgacctcgagatgcatcacccagatcaaaacctcact
tcttttctccaagaagccgagctcgtaaaacaagaaatgaactcgattcgcgatacttta
acccgactcgaatccgctaaccaagaatccaaatcccttcacaacccagaatctttaaaa
tcaaacagaagaaaaatcaatggggaaatcatgaatgttttgaaaaaggcgaaaactata
aaatcaagacttgaagaaatggacagggcgaatgcggaaagtagacgcctttcgggttgt
aaaatggggacacccattgaccgtacaaggactgcggtggcgaatgggttgagaaagaag
cttaaggagctgatgatggattttcaggttttgagacagaggatgatgacggagtataag
gagacggtcggccggaggtattttacggtcaccggagaagaagctaatgaggaagttatt
gaaaagattatctcaagtggaagtgatggtcaaggtggtgaagaattcttgtctagagct
attcaggagcatggaaggggaaaggtattggaaacagtagtggaaatacaagaccgccac
gacgcagccaaggagatagagacgagtctattggagctccaccaagtgttcttagacatg
gcggtgatggtggaggctcaaggcgaaaaaatggacaacatcgaggatcatgtgatgaat
gcagctcactatgtcaatgccgggactaaaaatctgaaaaccgcaaaagggtatcaaagg
agcagcagaaagtgtatgtgtattgggatcatacttcttctgataatcattctagtgatt
gtcatcccaattgtcactagcattagcaaatcttga
DBGET
integrated database retrieval system
