KEGG   Erigeron canadensis (horseweed): 122600570
Entry
122600570         CDS       T07610                                 
Name
(RefSeq) WD repeat-containing protein 75
  KO
K14552  NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    122600570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ecad03009]
    122600570
Ribosome biogenesis [BR:ecad03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    122600570
SSDB
Motif
Pfam: Beta-prop_WDR75_1st Beta-prop_WDR75_2nd WD40_Prp19 WD40_WDHD1_1st WD40 Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd WD40_CDC20-Fz Beta-prop_IFT140_1st WDR55 Beta-prop_EML Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd PEP5_VPS11_N Beta-prop_IFT122_1st WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 122600570
NCBI-ProteinID: XP_043629244
LinkDB
Position
5:complement(33406474..33412019)
AA seq 801 aa
MIRGGKSFVSSQPAFSNDAKKLLVCTGNTVSIFSTATGLQVAELEGHTALVTSITVVPAT
TPASRILCYCWTTSLDGTIKYWDISIPELLKTTDIQLPVYSMVIPSLLAQQSENNEKSPD
LYAYISVANESSGQILKCNLSKSRLVRGVIVSESKKPVKLTISSSGKYFGFYEKRKIRIW
EVPAKDHKNVSHRKIKLLHSKNVSCLAFHPTDRIVAAGDVTGRILVWRGFGDRTFAGKNL
TNGKALKDEDENPGVRGDGDADSCTTWHWHSAEVKVLFFSSDGAYLYSGGKEGVLVVWQL
DTGKKKFLPRIGTPLLNYMNSPDPSLSSISCADNRIHILKMPSMEILKSISGIKLPSPVP
EMFKGACNDIVFDHTAGLIAVRTENYCIQFYSLFDDREISEVQVCERNHQPSDDVTMILN
LVALSFEGSVMCTVETRMAEEGIGGFVTLKFWERESQNNDFSLSTVIYEPHRDAGVSAIA
FHPTRGMAVSASYGGDFKVWVSNHDVQQNDKLIQRTRWACHAVGSYRKKPMTAAAFSTDG
SVLAVAAENVITVWDPDKNVLVAVIGSSRESIVNLSFIGESNFLVSASRGSNPQLSVWSM
SKLAVAWSYKLHTEAIACSEKEPLFAVLVLLPESSKTDVASLHKDTGAILVFNAGEPVPI
ASWFVTKAKGGAIAFIQRSISMDDSMDESVSGRILLAYVNGDHEYALFNPQDVETYERKA
RYADSVPGLEGTGHFGYASIYGELPEFKLKTFKASADPVKPSEKPWETIFDGPSHSLPPL
IKLCSTFMESLMEKRTSAMVE
NT seq 2406 nt   +upstreamnt  +downstreamnt
atgataagaggaggaaaaagctttgtgtcttcgcaacctgcattctcaaatgatgcaaag
aaactcttggtatgcaccggaaacaccgtttccattttcagcaccgcgactggtttacag
gtagcggaattagaaggtcatacagcacttgtgacatctataacagttgtaccagcaacc
acacctgcaagcaggattttatgctattgttggacgacttcactcgatggtacgatcaag
tactgggatatttctatacctgaattattgaagactacagatattcaacttccagtctat
tcaatggtgattccatccttgcttgctcagcagtccgagaataatgaaaagtcacctgat
ctttatgcttatatctcagtggcaaatgaatcaagtggccagatcctgaagtgtaatttg
tccaagtctcgcctggttcgtggagtgatagtatcagagagtaaaaaaccagttaaatta
acaatttcttcaagtggcaagtactttggcttttatgaaaagcgaaaaattcgtatatgg
gaagtacctgcaaaggatcacaagaatgtcagtcatcggaaaataaaactattacactcc
aagaatgtgagttgccttgcttttcatccaacagataggattgtagctgctggtgatgtg
actgggagaattttagtttggagaggttttggtgatagaacatttgctggtaagaattta
acaaatggtaaagcattgaaggatgaagatgaaaatccgggtgtcaggggtgatggtgat
gcagattcttgtactacatggcattggcattctgcggaggtcaaggtcttattcttttct
tcggatggagcgtatttgtattcaggtggaaaagaaggagttcttgtggtatggcagcta
gataccggaaagaagaaatttttacccagaatagggactccacttcttaattatatgaat
tctccggatccttctctttcatctatatcttgtgcagataaccggattcatattctaaaa
atgccatcaatggagattttgaagtccatttctggaatcaagcttccatctcctgtccca
gaaatgtttaaaggcgcatgtaacgatattgtgtttgaccatactgcgggattgattgct
gttcgtacggagaactactgtattcagttttatagcttatttgatgaccgtgagatatca
gaggttcaggtctgtgaaagaaatcatcagccaagtgatgatgtcacgatgattttaaat
ctagttgcactttcattcgaaggctctgtgatgtgtaccgttgaaactagaatggctgaa
gaaggaataggcggttttgtaacactcaagttttgggaacgcgagtcacagaacaatgac
tttagcttgtccactgttatatatgagccccacagggatgccggtgtatctgcaattgct
ttccatccaactcgtggcatggccgtcagtgcttcttatggtggtgattttaaggtttgg
gttagcaatcatgatgttcaacagaatgataaattgattcagaggactagatgggcatgt
catgctgttggttcatacaggaaaaaacctatgacagctgccgcattttccactgatggt
tctgtgttggcagtagctgcagaaaatgttatcactgtgtgggacccagataaaaatgtt
cttgtggctgtgattgggtcttcccgtgagtcaatagttaatttatcgtttattggagag
tccaattttcttgtatctgcatctcgaggttcaaatccacagctttcagtttggagtatg
tccaagctggcggttgcctggtcatataagcttcacacagaagctattgcatgttcagaa
aaagaacctctctttgctgttcttgttcttcttcccgagtcatctaaaactgatgtcgcc
tcattacacaaggacactggggctatacttgtatttaatgcaggagaacctgttcctatt
gcttcatggtttgtgacgaaggcaaagggaggggcgattgcttttattcaaagaagtata
tccatggatgacagcatggatgaaagtgtatcaggtcgtattttgcttgcatatgtaaat
ggtgatcatgagtatgctcttttcaatccacaagatgttgagacatatgaaaggaaagct
aggtacgcagatagtgtacctggtctggaagggacagggcattttgggtatgcatctata
tatggggagctacctgagttcaagttgaaaacatttaaagcatctgccgaccctgtaaag
ccttcagaaaagccatgggagaccatttttgatggaccatcacatagtctacctcctctc
attaagctctgttctacttttatggaatcactgatggagaagcgaactagtgctatggta
gagtag

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