Erigeron canadensis (horseweed): 122600680
Help
Entry
122600680 CDS
T07610
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.5-like
KO
K14487
auxin responsive GH3 gene family
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122600680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
122600680
NCBI-ProteinID:
XP_043629369
LinkDB
All DBs
Position
5:31754137..31756791
Genome browser
AA seq
604 aa
AA seq
DB search
MPEAPKNQHGGSKTDYTNNNLTEENKKSLEFIEQVTSNPDDVQQRVLFDILTQNANVEYL
VRHQLSGQTDRETFKKLVPVITYEDLKPDITRIANGDKSPILSSHPISEFLTSSGTSGGE
RKLMPTIEAELGRRSMLYSLLMPVMSQFVPGLDKGKGMYFLFVKSEAKTPGGLVARPVLT
SYYKSNHFKERPYDPYTNYTSPNETILCQDSYQSMYSQMLCGLFLNRQVLRVGAVFASGF
IRAITFLENNWMDLCKDIRTGTVNQEVITDPDVKKAVLRVLKPDPELADFIEHECSKKSW
QGIITRLWPNTKYVDVIVTGTMSQYIRTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKP
SEVSYTIIPTMAYFEFLPLGTNEEETQNLIDLSEVQLGQYYELVVTTYAGLYRYRVGDVL
RVAGFKNKAPQFNFICRKNVALSIDADKTDEVELHQAVEKASAHLVPYDATLTEYTSFAD
TTTIPGHYVIFWELSVNGPTQVPPSVLEDCCLAIEESLNSVYRQGRAADKSIGPLEIKVV
ENGTFDKLMDYAISLGASFNQYKTPRCVKYEPIIELLSSKVVSSYFSPKCPKWVPGHKQW
NSIN
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgccggaagcaccaaagaaccaacacggtggttcgaaaacagactacactaataacaat
ctaaccgaagaaaacaagaaatctctcgagttcattgaacaagtcacgtcgaatccagac
gatgttcaacaacgtgtgcttttcgatatcttaactcaaaatgccaacgttgaatacctt
gttcgccatcaactttcgggccaaactgaccgtgaaacgtttaaaaaactcgtacccgtt
atcacatatgaagatcttaaacccgatatcacacgtattgccaatggtgacaagtcccct
atcctatcttctcatcccatttctgaattcttaacaagttctgggacgtctgggggtgaa
agaaagttgatgccaaccattgaagccgagctaggaagaaggtcaatgctgtatagtctt
ttgatgccagtgatgagccagtttgtgcccggtttagataaagggaaagggatgtatttc
ttgtttgtcaaatccgaagccaagactccgggcgggcttgtagcccgacccgttttgact
agctactacaaaagtaaccatttcaaggaaagaccatatgacccatataccaactacact
agcccaaatgaaaccattttgtgtcaagattcttatcaaagcatgtactcacaaatgctt
tgtgggttgttcttaaatcgacaagttctccgagtcggtgctgtttttgcttctgggttc
atccgtgccataacgttcttggagaataactggatggatctctgcaaagatatccgaact
ggcacggtgaaccaagaagtgatcaccgacccggatgttaaaaaagctgtgctccgggtc
ttgaaaccagacccggagcttgcagactttatcgagcatgaatgctcgaaaaagtcatgg
caagggattattacaagactttggcccaacacaaaatatgttgatgtgatagttaccggg
accatgtcacaatacattcgcacacttgattactatagtaatgggctccctcttgtttgc
actatgtatgcctcttctgaatgttactttggtgtcaatcttaacccactttgtaaacct
agtgaggtttcatacaccatcattcccaccatggcttatttcgaattcttgcctcttggt
accaatgaagaagaaacacaaaaccttattgatctttcagaggttcaactcggacaatat
tatgagcttgttgtcaccacctatgctggattatacaggtatagagttggtgatgttttg
agggtggcaggattcaagaacaaagcaccacaattcaatttcatttgtcggaaaaatgtg
gctttgagtatagatgcagataaaaccgatgaagttgaattgcaccaagcagtcgaaaag
gcatcggcccatttggtcccatatgatgcgactctgaccgagtacacaagctttgctgac
actaccacaatcccgggccactacgtgatcttttgggagctaagtgtaaatgggccaacc
caagtcccaccatccgtgctcgaagactgctgtctagccatcgaagagtcgctcaacagt
gtttaccgacagggtcgggctgctgacaagtcaatcgggccacttgagatcaaggtagtg
gagaatgggacatttgataaactcatggactatgcaataagtttaggtgcttccttcaac
cagtacaaaacaccaaggtgtgtgaaatatgaacccattatcgagctattgagctcgaag
gtggtgtcgagttactttagcccgaaatgccctaaatgggttccgggtcataagcagtgg
aacagcataaattaa
DBGET
integrated database retrieval system
