Erigeron canadensis (horseweed): 122600751
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Entry
122600751 CDS
T07610
Name
(RefSeq) protein FIZZY-RELATED 2-like
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122600751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122600751
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
122600751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
eIF2A
Beta-prop_HPS5
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR35_TULP_N
Tricorn_2nd
Beta-prop_DCAF4
Beta-prop_SCAP
KNTC1_N
Beta-prop_SPT8
Peptidase_M10_C
Beta-prop_RIG_1st
MIOS_WD40
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
122600751
NCBI-ProteinID:
XP_043629443
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Position
5:37783019..37789015
Genome browser
AA seq
489 aa
AA seq
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MDSDSNSKIFNQSSLSSSSSSNSQTLQTPTKTSQSISNIYYHPSPSRPIYSDRFIPCRSS
SNFALFNISTPPAKAVENGRSGEESSSSAAYKSLLRTALFGSDLGFAPPSTPDKKCGFPV
SNSVNRNIFRFKTETRQSMHSLFPLGFDDHFIPGVSQTPVKAPRKVPRSPYKVLDAPALQ
DDFYLNLVDWSSQNVLAVGLGNCVYLWNACSSKVTKLCDLGNDDSVCSVGWAQRGTNLAV
GTSNGKVQIWDAARCKRVRTMEGHRLRVGALAWNSSILSSGSRDKSILQRDPRAQEDFVS
KLSGHKSEVCGLKWSYDNRELASGGNDNRLLVWNLHSTQPVLKYCEHTAAVKAIAWSPHL
HGLLASGGGTADRCIRFWNTTTNSHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIV
WRYPTMSKLATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSQNTESEIGA
SSFGRTYIR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggattccgattccaattccaagattttcaaccaatcatcattatcatcatcttcttca
tcaaattcacaaactttacaaacacccacaaaaacctcacaatcaatttccaatatttat
taccacccatcaccatctcgccctatttacagcgaccggtttatcccatgccgatcatct
tccaattttgcccttttcaacatctcaacgccgccggcgaaagccgtagaaaatggccgg
tccggtgaagaatcttcatcttctgctgcttataagtcccttttgagaactgcattgttt
ggttcggatctggggtttgccccaccaagtacccctgataagaaatgcggttttccggtt
tcgaattcggttaatcggaatatttttcggtttaaaactgagactagacagtctatgcat
tctttgtttcctttgggatttgatgatcattttattcctggtgttagtcaaactcctgtc
aaagctccaagaaaagttccaagatctccttataaggttttggatgcaccagcattgcaa
gatgatttttatttaaatcttgttgattggtcttctcagaatgtgttggctgttggattg
gggaattgtgtttatttatggaatgcttgtagtagtaaggtgacgaaattgtgtgatctg
ggaaacgatgatagtgtgtgttcggttgggtgggcgcaacgggggactaatcttgctgtt
gggactagcaatgggaaagttcagatctgggatgccgctcgttgtaagagagtaagaacc
atggaaggacatagattacgtgttggagcactggcttggaattcatctattttatcttca
ggaagtcgagataaaagtattcttcaacgagatccacgtgcacaagaagattttgttagt
aagttaagcggtcataaatcagaggtctgtggactcaagtggtcttatgataatcgtgaa
ttagcatcaggtggaaatgataacaggcttttagtctggaacctacattcaacacaacct
gttttaaaatactgtgaacatacggctgctgtgaaagcaattgcctggtcgccacatctt
catggactcttggcatctggtggaggtactgcagatcgatgcattcgcttttggaacaca
accaccaattctcatctgagctgcatggatactggtagccaggtatgcaatcttgtgtgg
tcaaagaatgtcaacgaacttgtgagcacccatggatattcccaaaaccagattattgtt
tggagataccctacaatgtcaaagctggcaacacttactgggcacacttacagagtcctt
tatcttgcaatctcacccgatgggcagacaattgtgacgggagccggagatgaaacactt
agattttggaatgtgtttccttcgcctaaatctcagaatacggagagtgaaattggtgca
tcatcttttggcagaacgtacatacgctaa
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