Erigeron canadensis (horseweed): 122600988
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Entry
122600988 CDS
T07610
Name
(RefSeq) protein argonaute 4-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122600988
03036 Chromosome and associated proteins [BR:
ecad03036
]
122600988
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122600988
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122600988
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122600988
microRNA pathway
RISC loading complex
122600988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
122600988
NCBI-ProteinID:
XP_043629700
LinkDB
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Position
5:complement(42717661..42726031)
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AA seq
905 aa
AA seq
DB search
MDSANGNGEATEALPPPPPVSEDVVPLKGDELPKKIMRVPMARRGFGNKGQKSQLLTNHF
KVNVSNVDGHFFHYCVTLFYEDGRPFDGKGVGRKLLDRVHETYGSELAGKEFAYDGEKSL
FTVGALPRNKLEFTVVLDNVNSNRNNGNASPDNDADKKRIRRSYQSKSFKVELSFAAKIP
MQAIAQALRGHESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDVKTFTDVGGGVLG
CRGFHSSFRTSQGGLSLNIDVTTTMIIQPGPVVDFLIANQNVKDPYSIDWAKAKRTLKNL
RVKNEETNVEYKITGLSEKPCNEQMFSFRQKSKDENGEFETLEVTVYDYFVNYRKMSLRY
SADLPCINVGKPKKPIFLPIELCSLVSLQRYTKSLNSMQRASLVEKSRQKPLERMRVLTD
ALKLNNYDGEPLLRSCGISINNNFTQVEGRVLQAPKLKAGNGEDFFPRNGRWNFNNRKLV
DPTKIERWAVVNFSARCDLRNLVRDLIKCGGLKGIKIDEPFDVFEESPQNRRAPPVARVE
KMFDNIQSKLPGAPQFLLCLLPERKNSDLYGPWKKKNLAEYGIVTQCIAPMRVNDQYLTN
VLLKINAKLGGLNSKLAVEVSTSIPMVSKSPTIILGMDVSHGQPGQSDVPSIAAVVSSRH
YPLISRYRASVRTQSPKMEMIDSLFKKVSETEDEGIMRELLLDFYVTSAKRKPEQIIIFR
DGVSESQFSQVLNIELDQIIEACKFLDDKWSPKFLVIIAQKNHHTKFFQPGSPDNVPPGT
VIDNKVCHPRNNDFYMCAHAGMIGTTRPTHYHVLYDEIGFSADDLQELVHSLSYVYQRST
TAISVVAPICYAHLAATQMSQFMKFEEHSETSSSHGGTGVTSAGAVPVPPLPKLQENVCN
SMFFC
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggattcagcaaatggcaatggtgaggcgacggaagctttaccaccacctccacctgtt
tctgaagatgttgttccattaaaaggggacgagctgcccaagaagatcatgcgtgtccca
atggctaggcgtggctttggcaataaaggccaaaaatctcagctgttgactaaccacttt
aaagtgaacgtctctaatgtggatggccacttctttcactactgtgtgacccttttctat
gaagatggtcgtccatttgatggaaaaggcgtgggaaggaaactgcttgatagagttcat
gaaacatacggctctgaattagctggaaaagaatttgcatatgatggggagaagagtttg
tttactgttggtgcacttccaagaaacaaactcgagtttactgttgtactggataatgtt
aattcgaatagaaacaatggaaatgcaagcccagataatgatgctgacaaaaaaagaata
cgccgttcgtaccagtctaaaagttttaaggtggagttgagttttgcagcgaaaatcccg
atgcaggcaattgcacaagctctgcgcggtcatgaatctgagaactctcaagaagctttg
agggtgctcgatatcatcttaaggcagcatgcagctaaacagggatgccttcttgttcga
caatcatttttccacaacgatgttaagaccttcactgatgtgggtggtggtgttcttgga
tgtcgtgggttccattctagcttccgtacatctcagggtggtctatccctgaacattgat
gtaactaccacgatgattatccaacctgggccggtggtcgattttctgattgcaaaccag
aatgtgaaagatccctattccattgactgggcaaaggctaagcgtaccttaaagaatctt
agggtgaagaatgaggagactaatgtcgagtacaagataactggtttgagtgagaagcca
tgcaatgagcaaatgttttcgttcaggcagaagtccaaagatgaaaatggtgaatttgag
actcttgaagttactgtatacgattattttgtgaactatcgcaaaatgagtttgcgctat
tctgctgatttgccttgcatcaacgtggggaagcctaaaaagccaatatttcttcccatt
gagctctgttcgttggtctctttacaacgatatacaaaatcactcaattcgatgcaaaga
gcctctttggtggagaaatctcgccaaaagccactggaaaggatgcgggttttgactgat
gctttaaaactcaataattatgatggtgagcccttgctgcgatcttgtggcatttcaata
aacaacaatttcactcaagttgaaggaagagttcttcaagcaccgaagctgaaagctggg
aacggtgaagatttcttcccacggaatggtcgctggaattttaacaacaggaaacttgtg
gatcccactaaaattgaacgatgggctgttgttaacttttctgctagatgtgaccttcga
aaccttgtaagagatttaatcaaatgcggagggttgaaaggaattaaaatcgatgagcct
tttgatgtctttgaggaaagtcctcaaaataggcgggcaccacctgttgcaagagtggag
aaaatgtttgacaacattcagtctaaacttcccggtgctccacagtttctactttgcttg
ttgcctgagagaaagaattctgatctctatggtccctggaagaagaagaatcttgcggag
tatggaatcgtaactcaatgcattgctcccatgcgtgtcaatgatcaatatttgacgaat
gttctgcttaagatcaatgctaagctcggagggttgaactccaaattagctgttgaggtt
tctacatctattcccatggtatcaaagtcgcctacaatcattcttggaatggatgtgtcg
catggccagcctggccaatctgatgtcccctcaattgctgcggttgttagttcacgacac
tacccattgatttctcgttatagagcttctgtgcgcacacaatctccaaagatggaaatg
atagactctttgttcaaaaaagtttctgaaacagaggatgaaggcatcatgagggaactt
ctccttgacttttatgtgacttcagccaagcgaaagcccgagcagatcattatctttagg
gatggtgtaagtgagtctcagttcagtcaggttcttaacatcgaattggaccaaattatt
gaggcatgcaagtttcttgatgataaatggtcccccaagtttctcgtgataattgcccaa
aagaatcaccacacaaagtttttccagccaggatctcctgataatgttccacctggaact
gtgattgataacaaggtctgtcatcctcgtaacaacgatttctacatgtgtgcgcatgct
gggatgatagggacgaccaggccgacacattaccatgtgctatatgatgaaatcggtttt
tcagctgatgatctccaggagcttgtgcactctttgtcttatgtctaccagagaagcacc
actgcaatttctgttgtggcacctatatgctatgcacatttagcagccacacagatgtct
cagtttatgaagtttgaggaacactccgagacctcttcgagccatggtggtactggtgtt
acctcagctggagctgtgccagttcctccgctgccaaaacttcaggagaatgtctgcaac
tccatgttcttctgctaa
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