Erigeron canadensis (horseweed): 122601525
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Entry
122601525 CDS
T07610
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00040
Pentose and glucuronate interconversions
ecad01100
Metabolic pathways
Module
ecad_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122601525
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
122601525
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GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122601525
NCBI-ProteinID:
XP_043630213
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Position
5:29373005..29375088
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AA seq
419 aa
AA seq
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MVKSKPTIVFVIFMFMVVVSQAHVFDITKFGAKPGSEISKPLCDAWRAACGTPAPSKLLI
PKGQFCLNVIEFKGPCKARVEVQIDALLIGPKDPKVIPKGKQWITFSYINGLTVSEYIDT
TNIYIYHNHRDCDIVSGCGTLDGIGGAMAWPSNNPKKNAHHKKPCGLQYNLSFNFIQNAL
ITGITSKDSKNFHVNVMSCTNVMFDKFHILAPAESPNTDGIHLGWSKHITIRNSIIRTGD
DCISIGDGCENLHIEGVKCGPGHGISVGSLGRNPGEKPVKGVFVKNCVFTCTQNGVRIKT
WPDSLPGEVADMHFEHLQMDKVENPIIIEQDYCPHGACSKSKPSLVKVHNIFIKDIKGTA
TTPTVVKLRCSKANNGCENVRIHDIHLTYHGPHGPARQECCNVKPIYSGSLVPPGCARS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggttaaatccaaaccaacaatagtttttgttattttcatgttcatggtggtggtatct
caggctcatgtttttgacatcacaaagtttggcgcaaagcctggttccgaaattagcaag
cctctatgcgatgcttggagagcggcatgtggtacgcctgcaccaagcaaattgctcatt
ccaaaaggccagttttgcttgaatgtcattgagtttaagggaccttgcaaagctagagtt
gaggttcaaatcgatgcacttttgatcggtcccaaggaccctaaggtcattcctaaagga
aagcaatggattacgtttagttacatcaatggcctgaccgtatcagaatatattgacacg
acgaatatatatatatatcataatcatcgtgattgtgatattgtttcaggttgtggtacg
ttagatggcattggaggagccatggcatggccatcaaataatccaaagaaaaacgctcac
cacaaaaaaccgtgtggccttcagtataatcttagcttcaacttcatccagaatgctttg
attaccggaataacttcaaaagacagtaaaaatttccatgtcaacgtgatgtcgtgtaca
aacgtaatgtttgacaagtttcatatattggctccagcagagagccctaacacggatgga
atccaccttggatggtcaaaacacattactattaggaattccataattagaaccggtgat
gattgtatctcgattggtgatggatgtgagaacttgcacattgagggagtgaaatgcggt
ccgggccatggtataagtgttggaagcttgggtagaaacccgggtgagaaaccagtgaaa
ggggtttttgtgaaaaactgtgtatttacatgtacacaaaacggtgtccggatcaaaaca
tggcctgattctcttcctggagaggttgcagatatgcattttgaacatcttcaaatggat
aaagttgaaaacccaattatcattgaacaggattattgccctcatggcgcatgctcaaaa
agcaaaccatcgttggttaaggttcacaatatattcatcaaggacatcaagggaaccgcg
actacaccaacagttgtaaagcttagatgcagcaaagcaaataatggttgcgagaatgtg
aggattcacgacattcatctaacgtatcatggtcctcacgggcctgcgcgtcaagaatgt
tgcaacgttaagccaatttactctggatcattggtgcctcctggttgtgcacggagttga
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