Erigeron canadensis (horseweed): 122601836
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Entry
122601836 CDS
T07610
Name
(RefSeq) Fanconi anemia group I protein
KO
K10895
fanconi anemia group I protein
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122601836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122601836
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
122601836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_S2
FANCI_HD2
FANCI_HD1
FANCI_S1
Gcn1_N
Motif
Other DBs
NCBI-GeneID:
122601836
NCBI-ProteinID:
XP_043630505
LinkDB
All DBs
Position
5:complement(41850813..41861287)
Genome browser
AA seq
1357 aa
AA seq
DB search
MTTTTVTNHHNPPNSLTPDDIIRLAQYHTTAPLHPFLLSPTSHQTLISHLFTLPESVIST
YTSSLLSLISPSLSLSTLTSSLLTSYISLFTSHKFPHNHTSYKTIHLFIPHLDTLPIPDL
LSVSESILSGLDDPDDHELDDFQLLDLLPNCLNIVYNSEMHSLKPNETVNGLFDRMLDTR
WSGVLIVKLVSIIREFQFVDKLRCRQFVAKVFDEMHCVEMQDLPSLVYQLLVLASKGFCK
REVVQGVVVFFGSRIGVKKASANVVREVEGTVLLHVNFAVKQDPSLGQEVMGLVRSDVHV
IDHFVVGLLLSIARVRRYSESSMGTLKTALCNVYKDYKFSRHCKWLPDDLKEEYLQNAIL
TEKAVIRAVNASNYGREHIIPSIVQLAFVLVESVEEISYKDLANTGLMGSHELGIQMLKS
LFEAHDMARNEIIEQCKFRILSLKPQQSLAIIRLLGNLVQNYPYPMLEYVSHLKELLDYF
GFMQSKVASHLISVLLPLIKFSDNLQDYIILVVRKAMFRQEDQIRIAAAEAIIYLVVADK
QSKQNRPSAYQESSSQASSSQAHEIPSGMGGDLFKELSGLLQRCLYQQAQVKKIIYKGLL
KLVLVDPLTAGAVFNFLLPQFLKFYKEDGQLGINQCIKTENAKVCIAEPLDDLLSCVSWI
LLLQPQTRSDVRSDSFGFSLTQDTEYQQAGGTHAGESFSSALLTIRKLLRNENLEGLLGQ
MRDASSAAQQGERYKYSAQILSGIIEVTLNTVATELEKATNEKKIELEKEFIDLIDLYES
LGKHTSTSTHNSQYNGTRKGITQSTALELTYKNELDTTKPSKERASFLATSSIYQLFQIS
FELYKHDAAKSKLLHFVLNATFCQIKSLSLVAKDDTLKGLIYGDIKVLGPPLLKSIWLIM
RVDPKKKETKGKKDNEDRKGLILLALMCLKELLAVHSQSPEEMKVVEDMLSSSVDALDSE
GDQNDRGNGINTQSKEVFISKIVIPLVFKLLHSKLFQEVEILCDIAKMIGNTSSERSNIL
GIWAINKCKTSNLANPKIAKSLVTLALSCTQAPNDLVVARHMALELVKITGSPSAKPGTY
GIIQRSTETVIITVILQLAESVINDMDRLSMKLKTCFTGAYKDEKHNSHFTLEDTLYQRA
EAVVELISSFVVMTLKDSQAEHLLKLATKFYKNLARISKFHIAPKGCKQILPSLKCQKLV
EVTCKQLTAPLYTFVDLMQQNQQDNRASKGMINKIKRENRCIPDLIYQIEDYEKYLILLS
KASKINLLRHAKRSTARDFRIEYPKNISQQENGLDQEEPNEDNESTPQNDLVQDSGDGEE
DASDTALAAEDSEACDEDDNAMPSTKRSRIVHDSDDE
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccaccgtaaccaaccaccacaatccaccaaattctctaaccccagacgac
ataatccggttagcccaataccacacaaccgccccactccacccattcctcttatcccca
acttctcaccaaaccctaatttcacatcttttcaccctcccagaatccgttatctcaacc
tacacttcctctttactctctctcatctctccttcactttctctctctacactcacatcc
tctctcctcacttcttatatctctcttttcacttcccacaaattccctcacaatcacact
tcttataaaaccatccatctttttatccctcatctcgatactctcccgattcccgactta
ttatccgtttccgaatcgatcctttccggtttagatgatcctgatgatcatgaactagat
gatttccagcttttggacttgcttcctaactgtttgaatattgtgtacaatagtgaaatg
catagtttaaaaccgaatgagacggttaacggattgtttgatcggatgttggatacgcgt
tggtcgggtgttttgatagttaaacttgtgtcgataattcgtgagtttcagtttgttgat
aaattgagatgtagacagtttgtagctaaggtgtttgatgaaatgcattgtgtggaaatg
caggatttgccgtctttggtttatcagttattggttttggcgtcgaaagggttttgtaaa
cgggaagtggttcaaggggtggttgtgtttttcgggagtcgaataggggtgaaaaaggct
agtgcgaatgttgttagggaagttgaagggactgttttgttacatgtgaattttgcggtg
aagcaagatccttcattgggacaagaagttatggggcttgtcaggtcggatgttcatgtg
attgatcattttgttgttgggttgttgttgtcaatcgcgagagttaggaggtacagtgag
agctcaatgggaacgctgaaaacggcgctgtgcaatgtttacaaggattataagttctct
agacattgtaaatggctacccgatgacttaaaggaggagtatctgcaaaatgccatattg
acagagaaagcggtgataagagctgttaatgcgagtaattatggaagagagcatatcatc
cctagcatagtgcagttggcctttgtgttggtagaatcggtggaggagattagttataaa
gaccttgcaaatactggtcttatgggttctcacgagctaggcattcagatgctaaaaagt
ttatttgaggctcatgatatggcaagaaatgagataatcgagcaatgtaagtttagaata
ctttctctcaagcctcagcaaagtttagctatcataaggttacttggtaacctagtgcag
aactacccctatcctatgttagagtacgtttcacatttgaaggaattgttagattatttt
ggtttcatgcaaagcaaggttgcttcccatctgattagcgttttattgcccctcatcaag
ttcagtgataatcttcaggattacatcattttggtggtgcgcaaagctatgtttagacaa
gaagatcaaatccgcatagctgcagctgaagccattatatatttagttgttgcagataaa
caatccaaacaaaatagaccgtctgcttatcaggagtcatcaagtcaagctagtagtagt
caagcacatgaaatacccagtggaatgggcggcgatcttttcaaagagctcagtggttta
ttgcaacgatgtctctaccagcaggctcaagtgaaaaagattatatacaagggactccta
aagcttgtgctggttgatccattaactgcaggtgcagtttttaattttctcttgcctcag
tttctgaaattctacaaagaagatggtcaacttggtataaaccagtgtattaagacggag
aatgccaaagtttgtatagcagaaccactagatgatctcttatcttgtgtctcatggatt
cttttgcttcagccacagacaagatctgatgttcgttcagattcttttggtttctcgctc
acacaagacaccgagtatcagcaggcaggaggaacgcatgccggtgagtcgttttccagt
gctttgctgacaatccgtaagcttcttagaaatgaaaatctggaaggcttacttggtcaa
atgagagatgctagctcagcagctcaacaaggagagagatacaaatatagtgctcagatt
ttatcaggtattattgaggtgacattgaataccgttgctactgaattggagaaggcaact
aatgagaaaaagatagagttggagaaagaattcatagatctaattgatctttacgagtcc
ttggggaaacatacttccacatccacacacaattcacaatataatggtactagaaaaggg
ataacacagtctactgctcttgaactcacatacaaaaatgaattggacaccacaaagccc
tctaaagaacgagcttccttcttggcaacttctagtatatatcaattgtttcaaatatcg
tttgaactgtacaagcatgatgctgcaaagagtaaactcttgcatttcgtcttaaacgcc
actttttgccagataaaatctttgtctttagtggcaaaagacgatacattaaagggtttg
atctatggagatattaaggtgctaggaccacccttattgaaatcaatctggttgatcatg
cgggtagatccaaagaaaaaggaaaccaaggggaaaaaggacaacgaagatagaaagggt
cttattctcttagctctaatgtgcttgaaggaactgctagctgtccattctcaaagccca
gaggaaatgaaagtagttgaagacatgctatcaagttctgtagatgctcttgattccgaa
ggtgatcaaaatgatcgagggaatggaatcaacactcaaagcaaagaagtctttatctca
aaaattgtgatacccttggttttcaagcttcttcactcaaagttgttccaggaggttgag
atcctgtgcgacattgcaaagatgattgggaacacgtctagtgaaagaagtaacattctt
ggaatctgggcaataaataagtgtaaaactagtaatttggcaaatccaaagattgccaaa
agtctagtcactttagcactatcatgtacccaggctccgaacgatttggttgttgctcga
catatggcattggaattggtcaaaatcacgggatcgccatcagcgaagcctggaacatat
ggcattattcaacgctcaacagaaactgttataataactgttattttgcagttagcagaa
tcagttattaatgacatggatcgactcagcatgaagttgaagacttgcttcactggtgcc
tacaaagatgaaaaacataactctcatttcactttggaggacactttataccagagggct
gaagctgttgttgaactgatatcttcttttgtcgtcatgaccctcaaggattctcaagca
gaacatctactgaaattggccaccaaattttacaagaacttggctaggatttcaaagttc
catattgcgcccaaaggttgcaagcaaatcttacctagcctcaaatgccagaagcttgtg
gaagtgacttgcaagcagctaacagcccccttgtacacgtttgtggatttaatgcaacag
aatcaacaagataatagagcaagtaaagggatgataaacaagatcaaaagggagaataga
tgcatcccagatttgatatatcagatagaagactatgagaagtatctgattctacttagc
aaggctagcaaaatcaacttgttaaggcatgcaaaacgcagcactgccagagactttaga
atagagtatccaaaaaatatttcccagcaagaaaatggcctcgaccaggaagaacccaat
gaggataacgagtccacacctcaaaatgatttggtccaagactctggagatggcgaggaa
gatgcatcagataccgctttggctgcagaggattctgaagcctgcgatgaagatgacaac
gccatgcccagtacaaagagaagcagaattgttcatgactcggatgatgagtga
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integrated database retrieval system