Erigeron canadensis (horseweed): 122601902
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Entry
122601902 CDS
T07610
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A-like
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122601902
Membrane trafficking [BR:
ecad04131
]
Protein recycling
Others
EARP complex
122601902
Endosome - Golgi transport
Tethering complex
GARP complex
122601902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG4_N
XhlA
RINT1_TIP1
TPR_AP5Z1
HemX
DUF2570
Vps54_N
Motif
Other DBs
NCBI-GeneID:
122601902
NCBI-ProteinID:
XP_043630571
LinkDB
All DBs
Position
5:complement(44814857..44821072)
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AA seq
691 aa
AA seq
DB search
MQKIHSEIRVVDAEILVAVRQQSNAGTKAKEDLAAATHAVEELMYKVREIKTKAEQSETM
VQEICRDIKKLDCAKKHITTTITALHRLTMLVSAIKQLQVMASKRQYKEAAAQVEAVNQL
CSHFDAYRDIPKIIELRNKFMNIKQVLKSHVFSDFSSLGTGKEADEGNLLQQLSDACLVV
DALEPSVREELVKNICNKELISYQQIFEGAELAKLDKTERRYAWVKRRLRTNEEIWKTFP
ASWHVDYLMCIQFCKMTRTQLMEILVTLREKPDVGTLLMALQRTIEFEEELAEKFGGSCS
TKSVANDFEDVDKVENSNQIVMDIKKKYERKLVAHQGNPDDDKDSAVPGAGFNFHGIISS
CFEPHLMVYVELEEKTLMDHLEKLVQDERWDMDDGSHTNILSSSMQVFQRVLRAYAAKLL
MKLPKGGMGIVAAATGMDGHIKTSDKDERLICYVVNTAEYCHKTAGELAENVSKIIDSQL
ADSVDMTEVQDEFSSLITKALVTLVNGVETKFDTEMVAMARVPWGTLESVGDQSEYVNSI
NMIISGSVPILGSLLSPIYFQFFLDKLASSLGPRFYVNIFKCKHISETGAQQMLLDTQAV
KTILLDIPSLGRQTSGAVGYAKFVTHEMGKAEALLKVILSPLDSVADTYGALLPDGTPSE
FQRILELKVYSESLFTNIPLPNLFITNVMQP
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatacacagtgagatccgtgttgtggatgctgaaattcttgtagccgtccgc
caacagagtaatgcaggtaccaaagcaaaggaggatctagctgcagctacacatgctgta
gaggaactcatgtataaggttagagaaattaaaacaaaagccgagcaaagtgaaacaatg
gttcaagaaatatgtcgtgatattaagaagctggattgtgcaaagaagcacataacaacc
accatcacggccctccaccgtcttaccatgctagtctctgcaatcaagcaacttcaagtt
atggcttcaaaacgacaatataaagaagctgctgcacaggtagaggctgtcaaccagtta
tgcagtcattttgatgcctacagagatattccgaaaatcattgagctaagaaacaagttt
atgaacattaaacaagttctcaagtctcacgtgttctctgatttctcaagcttaggtaca
ggaaaagaggcagatgaaggtaatctgctgcagcaattatcagatgcttgcttggtagtt
gatgcgctggagccatcggtaagggaggaattggtgaagaatatctgcaacaaagagctt
atctcttatcaacagatatttgaaggagccgaattggcaaagttagataaaacagagagg
agatatgcttgggtgaaacgccgattaagaacaaatgaggagatttggaaaacttttcct
gcttcatggcatgttgattacctgatgtgtatccaattctgcaaaatgaccaggacacaa
cttatggagatcttagtaaccttgagagagaagcctgatgttggaacactactgatggca
ttacaacggacaattgaatttgaggaagagttagcagagaaatttggtggcagttgtagt
accaaaagtgttgcaaatgactttgaagatgtagataaagtggaaaatagtaatcaaatt
gtgatggatataaaaaagaaatacgagagaaaactagttgcacatcaaggaaacccggat
gatgataaagattcggctgtacctggagctgggttcaatttccatggcattatatcatct
tgctttgaaccacacttgatggtatatgtggaattggaagaaaaaactcttatggaccac
ctagagaagcttgttcaggatgaaagatgggatatggatgatggaagtcatactaatata
ttatccagtagcatgcaggtctttcaaagagttcttagagcttacgctgcaaagcttctc
atgaagctgcctaaaggtggcatggggattgttgcagctgccacgggtatggatggacat
attaagacatctgataaagatgaaaggctgatatgctatgttgtaaatacggcagaatat
tgtcataaaacggctggtgagttagctgaaaatgtctcaaaaataatagattctcagttg
gccgattcagtggatatgacagaagttcaggatgaattctcatcgcttataacaaaagca
ctagtaacattagtcaatggtgtggaaaccaaatttgatactgaaatggttgcgatggcg
cgtgttccatggggtacacttgaaagtgtcggagatcaatcagagtatgtcaatagcata
aatatgatcatcagtggcagtgttcccatacttggaagccttctttctccaatttacttt
cagttcttcttagacaagcttgcatcatccctaggtccacgcttctacgtcaatatcttc
aaatgcaagcatatatcagaaaccggagctcaacaaatgctgttggatactcaagctgta
aagacaatacttttagacattccatcccttgggagacagacatcgggagctgttggctat
gcaaaattcgtaacccatgagatgggaaaagctgaagcactcttgaaggttatattgtcc
ccccttgattctgtggcagatacatatggagcacttctgccagatggaacaccttcagag
tttcaaagaattctagagctcaaggtttatagtgaatcattatttactaatatccctcta
cctaatctgttcattactaatgtcatgcaaccatag
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