KEGG   Erigeron canadensis (horseweed): 122601923
Entry
122601923         CDS       T07610                                 
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03013  Nucleocytoplasmic transport
ecad03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122601923
   03015 mRNA surveillance pathway
    122601923
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecad03019]
    122601923
   03041 Spliceosome [BR:ecad03041]
    122601923
Messenger RNA biogenesis [BR:ecad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     122601923
Spliceosome [BR:ecad03041]
 Complex C
  Other components
   EJC/TREX
    122601923
SSDB
Motif
Pfam: Pinin_SDK_memA Olduvai
Other DBs
NCBI-GeneID: 122601923
NCBI-ProteinID: XP_043630590
LinkDB
Position
5:23081191..23086426
AA seq 413 aa
MGTTEIEKTEQELRKEIEELHRQQWQITERLRDPRGIRRGGVAGSGARNQSALGPRQRGF
VRPADRNEDDQPARKRRLSSTVVRIEEGEIIEDSVDASKGEDGNKETSLEVAGLGGDGDI
QDSRKGPSWARRKMDSEVPPSDNVPRILPKNEDPSLVNRNRRMLGQLLGTLEKFRKEDVK
LSGSEAFMRRSDSLKKAEQRAREESERLRLQEREQIAEKRRRDLTLRARVAAKAEEKKLE
LLFLQWSEHHKKLGNFLRTKAEPPIYYSFAKELDEDSALREERKEQTFQEWKAARREELS
QYQQQIGEQFVANVEKELEKWQNGRQKRNGNNDMLNLQETMDKELETHRLEHGPKTRKIP
GAVNNDDEDDVEDINVGEDDMMDDVLDVDDSRRVEETTKLEAGTLSPPPVMKE
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgggaaccaccgaaatcgaaaaaaccgaacaagaacttcgaaaagagatcgaagagctt
caccgtcaacaatggcagattacagaaagactccgtgaccctagaggtatccgaagagga
ggtgttgctggttcaggtgctcgtaatcaatcggctttgggtccacgtcaacgtggcttt
gttagacctgcggataggaacgaagacgaccaaccagcgcggaaaaggcggctttcgtct
actgttgttaggattgaagaaggggagattattgaggatagcgtggatgcttctaaaggt
gaagatggcaataaagaaacgagtttggaagtggctggattgggaggcgacggtgatatt
caggatagtagaaaggggccgagttgggctagaaggaagatggattctgaagttcctccg
tcggacaatgttcctagaatattaccgaaaaatgaagatcctagtctggttaataggaat
agaagaatgcttggacagcttcttggaactctggagaaattcaggaaagaagacgtgaaa
ctctctggctcagaggcttttatgaggagatctgattctttgaaaaaagctgagcaaaga
gcgcgtgaagaaagtgagagactgaggctacaagagcgtgaacaaattgcagaaaagagg
agaagagacttgacgcttagagcacgtgttgctgccaaggcagaagagaagaaattggaa
ctgctgtttcttcagtggagtgagcatcacaaaaaacttggcaattttttaaggaccaag
gcagagccccctatatattactcatttgccaaagagcttgatgaagattcagccctacgt
gaggaacggaaagagcagacattccaagagtggaaggctgctaggagagaagaattgtct
caataccaacaacaaattggtgagcaatttgttgccaatgttgaaaaggagcttgaaaag
tggcaaaatgggagacaaaaaagaaacggaaacaacgatatgttgaacttacaagaaaca
atggacaaagaactcgagactcatagacttgaacatggccccaaaacacgcaagatccct
ggcgccgttaacaacgatgacgaggatgacgtagaagatatcaatgttggtgaggatgac
atgatggatgatgtgctggatgtcgatgacagcagaagagttgaagaaactacaaagctt
gaagcaggtactctaagcccacctccagtaatgaaagaataa

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