Erigeron canadensis (horseweed): 122602002
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Entry
122602002 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A-like
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122602002
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122602002
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122602002
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
122602002
NCBI-ProteinID:
XP_043630681
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Position
1:55352089..55355585
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AA seq
373 aa
AA seq
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MEEVQKMEEGKSKSHLISPAAFVEGGIQEACEDSCSICLEGFCDNDPGTVTSCKHEFHLQ
CILEWCQRSSNCPMCWQAISLKDPSSQELLEAVEHERRVRFNPPRTSTIFHHPTLGDFEL
QHLPVGVNDSELEDRIIQHLAAAAAMGRTHHVGRREGSRNRSAAHSRPQFLVFSTNPNAP
PAVAVSASSGSVQVQAEPVDEPTAVDSPRASALYTGRGGGTVQHTLTSGRTNTSDSQHGT
SVIHRSSGSVSSPPDQDRAGPSEMQTPSDTWKSKFSAISTRYKESLSKSTRGWKDKLFNK
SPSMSSIGSEVRREVNAGIANMSRMIERLEVQDNNSEVHDHDSPASNLAEQVSDAGGSNH
NRIEIAGAHGGLN
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggttcaaaaaatggaagaagggaagagcaagagtcatttaatttcgcctgca
gcttttgttgaaggaggtatacaagaagcttgtgaggattcgtgtagcatttgcctcgaa
ggtttctgtgataatgatcctggaacggtgacaagctgcaagcacgagtttcatcttcaa
tgtattcttgaatggtgtcaaaggagctcgaattgtcctatgtgttggcaagcgattagt
ctaaaagatccatctagtcaagagttattggaggcggtagaacatgaaaggcgggtcaga
ttcaacccaccaagaacttccacaatatttcatcaccccacacttggggattttgaattg
caacatttgccagtgggtgtgaatgacagtgaacttgaggaccgaatcatccaacatctg
gcggctgcagctgccatgggtcgcacccatcatgtgggtagaagggaaggttcaaggaac
cggtcagcagctcatagtcgtccacagttcttggtgttttccacaaaccctaatgcacct
ccagctgttgccgtttcggcttctagtggttccgttcaagtgcaagcagaaccagttgat
gaaccgactgctgttgactcacctagggcatcagccttatatacaggtcgtgggggtggg
acggtccaacatacattgacatctggaaggactaacacctcagatagtcaacatgggacg
tcagttattcacaggagctcaggtagcgtatcttcaccgcctgatcaagatagagcaggg
ccatcagaaatgcaaacaccttcagatacatggaaatctaagttcagtgctatttcaaca
agatataaagaatcactatcgaagagtacaagagggtggaaagataaactttttaacaag
agtccatctatgtcgagtattgggtcagaagtaaggagagaggttaacgctggaattgct
aatatgtcgcggatgattgagcggcttgaagttcaagataataatagtgaagttcatgat
catgattctccagccagtaatttagctgaacaggtttcagatgcagggggaagtaaccat
aatcgcattgagatagctggtgcacatggtggtttaaactag
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