Erigeron canadensis (horseweed): 122602014
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Entry
122602014 CDS
T07610
Name
(RefSeq) glutamate receptor 3.5-like
KO
K05387
glutamate receptor, ionotropic, plant
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecad04040
]
122602014
Ion channels [BR:
ecad04040
]
Ligand-gated channels
Glutamate (ionotropic)
122602014
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
122602014
NCBI-ProteinID:
XP_043630686
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Position
5:complement(37282547..37286741)
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AA seq
943 aa
AA seq
DB search
MFLMSQYIIMIKRVILFVFGLWVMVVLLMAIKGVNGDTIVPFSFSFLSKRPSNVVNIGAL
FTVDSVIGRSVKPAIEAAIDDVNSNHTILNETRLNLILYDTNCSAFLGNIEALQLMENDV
VGIIGPQSSIIARLISHVVSELHIPLLSFGATDPTLSSLQYPYFVHTTLTDYYQMSAIAD
LVSYFDWKEVTAIFVDDDYGRNGIMALDDALDKKRAKISYKASYTPGASHSDITELLTGI
NLMESRVYVVHVYPDSGLDIFTVAKTLGMMTSGYVWITTDWLMAVLDSSEFPDPKTMDLI
QGVVSLRQHTSSSDFKKSFTNKWKSIKGKNTSSFNAYALSAYDSIWLLAHALDKFLKSGG
GLSFSNDSKLRQSNGSKLKFSALRIFNEGEQLLQTILATEFMGLTGKVKFDQQKNLMHPA
YDVLNIGGTGIRTFGYWSNYSGLSTSAPESLYAKQAKSSADDQHRLYSVVWPGGMSKVPR
GWVFPNHGKPLRVAVPYGYSYKEVVTKDESPKGAKGYCIDVFEAAVNLLPYPVTPEYILY
GDGQKNPSYTDLVRDVADDKYDAAVGDITIITNRTKVVDFTQPYITSGLVIVVPLNKSKP
KPWVFLRPFSLELWLVSGGCFLLVGFVVWILEHRLNDEFRGPPRRQIITVLWFSFSTLFF
SHRENTVSTLGRFVLILWLFVVLIINSSYTASLSSILTVEQLTTSIEGIDSLISSNEPIG
VQEGTFSYNYLIQELKIPKSRIIQLKDEVEYLNALHLGPKGGGVAAIVDELPYVELFMRY
SKCEFKIVGQEFTKSGWGFAFKRDSPLAVDLSTAILKLSENGDLQLIHDKWLSTTSCLSQ
STKVEGRSLSLNNFWGLFLVCGVACFICICIYFCRMLCEYRQYNAHEKDAREIMQADSTT
YSSRWSFCGINFRNLIEFYDKKEEEMRQILERNNRRVTRDPEE
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgatgagccaatatataataatgataaaaagagtgattctctttgtctttggc
ttgtgggtgatggtagtcttgctcatggcaatcaagggtgtaaatggagacacaatagtt
ccattttcattttcttttttgtcaaaaaggcctagtaacgttgtgaatattggagcattg
ttcacagtggattcagttatcggacgttccgtgaagcctgctatcgaggccgccattgat
gatgtcaactctaatcataccatccttaatgaaactcgactcaaccttattttgtatgat
accaattgcagtgcatttcttggcaacatcgaagctctgcagttgatggagaatgacgtg
gtgggtataatcgggccacaatcctccattattgcccgcttaatttcccatgttgtaagt
gaacttcacataccactcctttcctttggagcgacggatccaacactttcaagtcttcaa
tacccttactttgtccacaccacactaaccgactactaccaaatgtctgctatagccgac
ttagtttcatattttgattggaaagaagtcactgccatatttgtggacgatgattatggt
agaaatgggattatggccttggatgacgcccttgacaagaaacgagccaagatttcttac
aaagcttcatatacccccggtgcatctcatagtgacattactgagctactaactggaatc
aacttgatggagtctcgggtttatgttgttcatgtatatcctgactcgggtcttgatatt
tttactgtggcaaagacgcttgggatgatgacaagtggttatgtttggattactacagat
tggcttatggcggtattggattcatcagagtttccagatcctaaaacgatggatttaata
caaggggttgtttcgttacgccaacatacatcaagttctgattttaagaaatcttttaca
aataaatggaagagtataaaaggcaaaaacacatcaagctttaacgcatatgctctgtcc
gcttatgattccatttggttacttgcacatgctctagataaattcttgaaatccggagga
ggtctctcattttctaatgattcaaaactacgacaaagtaatggaagcaagcttaagttt
tcggctcttaggatttttaatgaaggagagcagcttctccaaacaatccttgccacggag
ttcatgggattgactggcaaggtgaaatttgaccagcagaagaatttgatgcatccggct
tatgatgttttgaacataggtgggacgggtatacggacttttggatattggtcaaactat
tcgggtctctcaacttctgctcctgaatcattgtatgcaaaacaagcaaaaagctctgca
gatgatcagcataggctttatagcgtagtttggcctggtggaatgagtaaagttccacgg
ggttgggtttttccaaaccatggaaagcctttgagagttgctgtcccatatggctatagc
tacaaagaagtggtgacaaaagatgagtctcctaaaggggcaaaaggatattgcatcgat
gtctttgaagctgctgtaaatttacttccttaccccgtcactccagagtacatattatat
ggtgacggtcaaaagaacccgagctacactgatcttgtgagagatgtcgctgacgataag
tacgatgcagctgtaggagatattactatcattacaaaccgaacgaaggtagttgacttt
acacagccctacattacgtcagggcttgtcatagttgttcctctcaacaaatcaaagccc
aagccgtgggtatttctgaggccgttcagccttgaattgtggttggttagtggtggatgc
tttctgttagttggattcgtggtatggattcttgagcatcggttgaatgatgaattccgt
ggaccacccaggagacaaatcatcacagttttgtggtttagcttctcaacgctgttcttt
tcacaccgagagaacactgtgagtacattgggacggtttgtactgatcctctggctgttt
gtagtattgattattaattcaagctacacagccagtttgtcatcaatcctcacggtagaa
caactgactacgagcatcgaagggatagatagtttgatttcaagtaacgagccgattgga
gttcaagaaggaacattttcttataactatttgattcaagagctgaagatcccgaagtct
aggatcatccaattaaaagatgaagtggaatacttaaacgcacttcatttaggtccaaaa
ggcggtggtgtcgctgccattgttgatgaacttccttacgttgagctcttcatgcgttac
tcaaagtgtgagttcaagattgttggtcaagagtttaccaaaagcggttggggtttcgca
ttcaagagagactcgcctttagcagttgatctatcaacagcgatactaaaactctcggaa
aatggagatctacaactaattcatgacaaatggctctctaccacttcgtgcttgtctcaa
agtacgaaagtcgaagggagaagcctctcgttaaacaacttttggggtctattccttgtc
tgcggtgttgcttgcttcatatgtatctgcatttacttctgcagaatgttgtgcgagtac
cgccagtacaatgctcatgaaaaagatgctcgggagattatgcaagcggactccacaaca
tacagcagtagatggtccttttgtggcataaacttcagaaatttgattgaattttatgat
aagaaagaggaagagatgagacagatactcgaaagaaacaatcgtcgagttacaagggac
ccagaagaatag
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