KEGG   Erigeron canadensis (horseweed): 122602223
Entry
122602223         CDS       T07610                                 
Name
(RefSeq) DNA repair protein RAD5B
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
ecad  Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecad03400]
    122602223
DNA repair and recombination proteins [BR:ecad03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    122602223
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX ResIII zf-C3HC4_2 DEAD zf-RING_2 Prok-RING_4 zf-RING_5 RING_XB3-XBAT31 zf-C3HC4_4 zf-ANAPC11 Baculo_IE-1 zf-RING_4
Other DBs
NCBI-GeneID: 122602223
NCBI-ProteinID: XP_043630871
LinkDB
Position
5:43353682..43359645
AA seq 931 aa
MVNPVSSLKPGSGFVKKEVKKGVEEEKKAVSLGVVETGDFAEEADWLIVGRTAITGLSTT
KGRELVDNEIVHFAFPNNDIKSSNNSYWTTSKAASGIVRFSTKRSGEIGRLPMEWSKCLI
PLVNSNKVKVLGRCVAAPENLSMMQEILLYISFYIHHSIFTDEGKCTWKLDCSSNIDSTI
YPLLTLFKLLKKSPFQKAEFTPEELDSRKRGLTLGSDLLQAASSLPSKKQKGGEPLLLEP
NKDAQVITESSLNKLVGAADMYNLEEMEPPMTLICDLRPYQKQALYWMTESEKGVNVEKA
EETLHPCWAAYRICDERATAIYVNIFSGEATTKFPKATQMARGGILADAMGLGKTVMTIS
LILARPGKGITENEDEDECVGKRRDYETKASRRPRGGTLIVCPMALLSQWKDELETHSAA
NSISVFVHYGGDRSNDPRVIAEPTVVLTTYGVLSASYKSHSENSIFQKVDWYRVVLDEAH
TIKAHKSQCAQAAFALSAYCRWCLTGTPLQNNLEDLYSLLCFLHVEPWCNWAWWNKLIQR
PYENGDKRGLNLVKAILRPLMLRRTKDTKDKEGRPILVLPPTDIQIIECEQSEAEHDFYD
ALFKRSKVQFDQFVAQGKVLHNYANVLELLLRLRQCCNHPFLVMSRGDSQQFSDLNKLAR
RFLDNNLDSSDPNPSKAYIEEVVDGLRRGENTECPICLESADDPVLTPCAHRMCRECLLS
SWRSPAYGLCPICRQTLRKSDLISCPTDSKFRVDVEKNWKESSKVSKLLECLENTMKKAC
GEKSIVFSQWTSFLDLLEIPLKRKKIGFLRFDGSLSQKNRERTLREFNETTDKMVLLMSL
KAGGVGLNLTAASNVYLMDPWWNPAVEEQAIMRIHRIGQKRTVCVRRFIVKDTVEERMQQ
VQERKQRMIAGALTDEEVRSARLEELKMLFR
NT seq 2796 nt   +upstreamnt  +downstreamnt
atggtcaacccagtttcgtctttgaaaccgggttccgggtttgttaagaaagaagtgaaa
aagggcgtggaagaagaaaagaaggcagtaagtttaggtgtggttgaaaccggtgatttt
gcagaagaggctgattggttaatagtcggtcggaccgcgataaccggtttatcgacaaca
aaagggcgggagttagtcgataacgagattgttcattttgcatttcctaataatgatata
aaaagtagtaataatagttattggactacttcaaaagctgcttctggaattgttagattc
tcgactaaaagatctggagagattggtaggctgccaatggaatggtcaaagtgtttaatt
ccgcttgtgaattcgaataaagtaaaagtacttggtagatgtgtggctgcacctgagaat
cttagtatgatgcaagagatattgctttatataagcttttatattcatcattcgatattt
acggacgagggaaagtgtacatggaagttggattgttcgtcgaatattgactctactatt
tatcctcttttgactttgtttaagctgttgaaaaagagcccattccaaaaggctgaattc
acaccggaggaacttgattctcgtaaacgtgggttaactcttgggagtgatttgctgcaa
gctgcatcatccttgccgtcaaaaaaacaaaagggtggtgaaccattgcttttagaaccc
aacaaagatgctcaagtcatcactgagtcgtctttgaacaagcttgttggtgctgcagat
atgtataacttggaggaaatggagcctccaatgacacttatctgtgacttgaggccatac
cagaagcaggctctctattggatgacagaatcagaaaaaggtgtaaatgttgaaaaagca
gaagaaacacttcatccgtgctgggcagcatatcgtatatgcgatgaaagggcgactgca
atatatgtaaatatcttctctggtgaagcaactaccaaattcccaaaagcaacacagatg
gctagaggaggaattctagcagatgcaatgggacttggtaaaactgtgatgaccatttct
ttgatccttgcaagacctggcaaaggaatcactgaaaatgaagatgaagatgagtgcgtt
ggaaagagaagagattatgaaacaaaggcttctcgaagaccaagaggtggaacactcatt
gtttgtccaatggctttgcttagccaatggaaggatgagcttgaaacccattctgcagca
aacagtatatctgtttttgttcactatggtggtgataggagcaatgacccaagagtgata
gctgaacctactgttgtcttgacaacttatggagttctttctgcatcttataaaagccat
tcggagaacagtatttttcaaaaagtagattggtacagagtggtgttagatgaagctcat
accatcaaggcacacaagagccaatgtgctcaagccgcctttgcattgtctgcatactgc
cggtggtgtcttactggtactcctctgcagaataatttggaagatctatacagtcttctg
tgtttcttgcatgttgagccatggtgtaactgggcctggtggaacaagctaattcaaagg
ccttatgaaaatggtgataagcgagggctaaaccttgtaaaagctattttaaggccactc
atgttgaggagaacaaaagataccaaagataaagaaggaaggccaattcttgttctccca
ccaactgatatccaaatcattgaatgtgaacaatcagaagctgaacacgacttctatgat
gcccttttcaagagatctaaagtccaatttgatcaatttgtagcccaaggaaaagttctt
cacaactatgccaatgtccttgagctcctacttagattaagacaatgttgcaatcaccca
tttcttgttatgagccgaggtgattctcaacagttttcggacctaaacaaacttgcaaga
aggtttcttgataataatcttgattcatcagacccaaatcccagtaaagcttatatagaa
gaagttgttgatggtttaagaaggggtgaaaacactgaatgtcccatatgtctagagtct
gcagatgatcctgtgcttacaccatgtgctcataggatgtgtagagagtgtcttttgtct
agctggagaagcccggcttatggcttatgccctatttgtaggcaaactttgagaaaaagt
gatcttatctcatgtccaactgatagcaagtttagagttgatgttgagaagaattggaaa
gaatcttctaaggtttcaaaacttttggaatgcttggaaaacacaatgaaaaaagcatgt
ggagagaaaagtatcgtttttagtcagtggacctcgtttttggatctcttagagattcca
ttgaagaggaaaaagatcgggtttctaagatttgatggaagtttgtcacagaagaatagg
gaaaggactttgagagagttcaacgaaacaactgataaaatggtgttgttaatgtcatta
aaagccggtggtgttgggttgaatttgactgcagcttcaaacgtatatcttatggatccg
tggtggaatcctgcagtagaggagcaggcaataatgagaattcatcgtattggtcaaaaa
cgaactgtttgcgttagaagattcattgtgaaggatactgtcgaggaacgaatgcaacaa
gttcaggaaaggaagcaacggatgattgccggagctcttactgatgaggaagtccgatca
gctcgacttgaagaacttaagatgctctttagatga

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