Erigeron canadensis (horseweed): 122602244
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Entry
122602244 CDS
T07610
Name
(RefSeq) organic cation/carnitine transporter 4-like
KO
K08202
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122602244
Transporters [BR:
ecad02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
122602244
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
122602244
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GFIT
Motif
Pfam:
Sugar_tr
MFS_1
DUF1304
Motif
Other DBs
NCBI-GeneID:
122602244
NCBI-ProteinID:
XP_043630891
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Position
5:complement(31776356..31781216)
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AA seq
534 aa
AA seq
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MTTPHNPSTSDLQSPLIPPQTKNNAIITNKQPHIIIERLCIDDMLQKYCGEFGYWQLKHF
VLTCMAWALEAFHTMVMIFADRQPDWTCNSGSGSNGECLLAKDVCGLEPGTWSWDGGSGM
STVAEWGLICGHKYKVGLVQALFFAGCMIGAGIFGHLSDSKLGRKGSLTVVCILNAIFGL
LTSLSPNYLTYVLLRFLTGFSTGGVGLCAFVLATEPVGPSRRGMAGMSTFYFFSGGIAML
SGIAYVFRTWRALYIASSVPSILFVLVILPFISESPRWYLIRGQSENAMKIMRAIATTNG
RSLPENVYVARDEEVKDIDEKSHEIRSKEIISGSVVDALKSRLTRIRLVLVVGINFTSSI
VYYGLSLNVVNLDTNLYLNVLLNSVAEMPAFFITAVLIDRFGRKPLAVGTQWFSGVFCIA
GSFMGSQGAWKVIRMTCGVLGIFGMAGTYNLLFIYAMELFPTVVRNAALGCATQAAQFGA
ILAPFVVVMGGGLPFMVFGVCGVLGGLLTFYLPETLNKPLYDTMNGMAYGENEA
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgactactccccataacccctccacctcggatctccagtcaccattaattccaccacaa
accaaaaataatgcaataataaccaacaaacaaccacatattattatcgaacgtctttgc
atagatgacatgttacaaaaatattgtggtgagtttggttattggcaattaaaacacttt
gtgttaacatgtatggcttgggcacttgaggcttttcatactatggtcatgatttttgct
gaccgtcaacctgactggacttgtaatagtggttcgggttcaaatggagaatgtttgtta
gctaaggatgtttgtgggcttgaaccgggtacgtggagttgggacggtggttcggggatg
tcaactgtggcagaatggggtttgatttgtggtcataaatataaagttgggcttgttcaa
gccttgttctttgctggatgcatgattggtgctggaatatttgggcatctatcagactca
aaactaggaagaaaaggttcactaactgttgtatgcatactaaatgccattttcggacta
cttacatccctttcaccaaactacttaacatatgtccttctccgcttcctcaccggtttt
agtaccggtggcgttggcctttgtgcattcgttcttgccactgagcccgttggaccttct
agacgtggtatggctggaatgtccactttttatttcttttcgggtgggatagctatgtta
tctgggatagcttatgtttttaggacgtggcgcgctttgtacattgcatcctccgttcct
tctatacttttcgtgcttgtcatcttaccgtttatttctgagtcccctcgttggtacctt
attagaggacagtcagaaaatgctatgaaaatcatgcgtgcaattgctactactaatggg
aggtctttacctgagaatgtgtacgttgctcgtgatgaggaagttaaagatattgatgag
aagagtcatgaaattcggtcaaaagaaattatatctggatcagttgttgatgcactcaaa
tcacgtttaacaaggatccgattggttcttgttgtgggtatcaatttcactagctcaatt
gtgtactatggtttaagcttgaacgtggtcaacctcgacacaaacctgtacctcaacgtt
ttactcaactcagtggcagaaatgccggcttttttcatcactgccgttttgattgatagg
tttgggaggaagccgttagcggttgggacacaatggtttagtggggtcttttgcattgca
gggagttttatgggaagccaaggagcatggaaggtgattaggatgacatgtggtgttctt
gggattttcgggatggcagggacttataatttgctatttatatatgcaatggagttgttt
ccaacggtggtgaggaacgccgcccttggatgtgctacacaggcagcacagtttggggcg
attctggcaccttttgtggtggttatgggtggtgggctgccatttatggttttcggggta
tgtggagttttgggtggtcttcttaccttttacttgccggaaaccttgaacaaaccttta
tatgacaccatgaacggaatggcttatggtgagaacgaagcatag
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