Erigeron canadensis (horseweed): 122602306
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Entry
122602306 CDS
T07610
Name
(RefSeq) proteasome activator subunit 4
KO
K06699
proteasome activator subunit 4
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
122602306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ecad03051
]
122602306
Proteasome [BR:
ecad03051
]
Eukaryotic proteasome
Regulatory particles
PA200
122602306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BLM10_mid
DUF3437
HEAT
DUF4042
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
122602306
NCBI-ProteinID:
XP_043630941
LinkDB
All DBs
Position
5:complement(33147937..33159530)
Genome browser
AA seq
1806 aa
AA seq
DB search
MHRYNAWLPPPVAEATKKEKDSFAGVVVSVKDSYFSDDPDSVYSTLKWISVIDLFIKAKS
EVSMEDVSDLVEFGLTVFNASQDKLYAQVRWGNVLVHLLNKFRKKLSLKVDWRPFYDSMI
QTHFTRNSGPEGWRIRQRHFETLTSLVRSCRRFFPPGSAREIWSEFSSLLENPWHNSAFE
GSGFVRLFLPTNLDNEDFYSREWIAACILQWDSIPNCQFWNSQWAAIMARVIKNYKSKDW
EDLLPEIFSRFMNMFEVPVASGSGSYPFSMDVPRNTRFLFSNRSQTPSKAIAKSIVYLLR
PGSLTQQHFEKLVNLLEQYYHPSNGGRWTYSLERFLFHLVYTFQKRLQCEKESEQIEFCL
GPSERESFVRTVLKLIDRGQYSKNENLSETVAAATSILSYVEPSLVLPFLVSRFHMALET
MTATHQLKTAVTSVAFSGRSLFFMSLSASAMEIDDANDADMFRDLLMISLTNALLGMDAN
DPPKTLATMQLIGSIFSNMATLDDDMDNLSFMPAEQFSEWLDEFLCRLFSLLQHLEPSSV
LNEDVHSPATSGTFLVEDGPQYFCMLEILFGRLSKSLYNQAIKKVSKFLKTNILPGAISE
VGLLCCACIHSNPELAVDQLVEPLLSSVISSLKGVPLTGFGGSGNFTGQSSDKARATLSP
ALETSIDYQLKVLSIGISYGGPSLLHYKDQFKEAIHFAFESPSWKVNIAGDQILRALLGS
LILYYPVDQYKSVSHHPSLTSLEEWISNKDFSKDEAFTGPKWHIPSAEEIQFANELLNLH
LESALDELLKICRDNIHSDPGNEKDHLKVTLLRIDSSLQGVLSCLPDFVPSFKNGNVENP
PFLIAGATGSSVGGTGLREKAANIIHVASKYLLEKKSDDSILLLLLIRIIEALGNYGSSE
YEEWTNHRQAWKLESVAIIEPPVNFIVPSHSNGKKRPRWALIDKAYMHNTWRTSQLSYHL
FRTSKNVSPSENVNVLMDDLLNLCVHSYDTVRTLAGRSLVKLIKRWPSLIAKCVLTLTEN
LRSASSPEYKVLGSCAVLGTQTVLKHLTLDPKSFSSFLLGILLSSHHESLKSQKALNELF
VKYNIYFAGISRNILRKSEDHSGTDFAALVSEISSMGFESTNLHWRYNLMANRVLLLLAM
SSRNESNLASKILSETAGHFLKNLKSQLPQTRILAISALNMLLKESPYRLSAEEQSVATG
SSHENAKSSLEGTLSNIFQEEGFFSDTFDSLSNVHIISDTDNSSSRGGHGNSSFQSLADK
SITRFYFDFSSSWPRTPTWISLFGTDTFYSSFARIFKRLVQECGVAVVLSLKGALEEFAN
AKERSKQCVAAEAFAGLLHADVFGLEEAWDSWMMALLQNILLAPSVESVPEWAGCIRYAV
TGKGKYGTRVPLLRQRIFDCLIEPLPQTVTTTVVAKRYSFLSAALIEVSPLRMPLSEIQL
HYKLLEELLDKMSHPTAHVREAIAIALSVLCSNIRLHESVNKDSSPENGKNLVNGKHGDG
WNQYLQERASELVVSIQNANPSDNSESLAETNTVSGSDSNSTDDVQWMETLFHFIISLMK
SGRSAFLLDVLVGFLYPVISLQETSNKDLSTLAKAAFELLKWRIFPAAHLRKAVAILLSS
AEDPNWRTRSATLTFLRSFMYRHTFILSNDEKQKIWKTVEILLTDNQVEVREHAAAVLAG
LMKGEDGELSKDFRERAYSEAIKLQKRRKQRNSSAGPSVASIHGCVLSLAACVLSVPYDM
PRWLPEHATLLARFVGEPSPIKSTVTKAVAEFRRTHADTWSVQKDSFTEEQLEVLADTSS
SSSYFA
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgttataacgcctggttaccacctccggtcgccgaagccaccaagaaagagaaa
gattcattcgccggcgttgtcgtttccgtcaaagattcttatttttccgatgacccagat
tctgtttactccactctcaaatggatttcagtcattgacttgtttataaaggcgaaaagt
gaagtatcgatggaagatgtttctgatcttgtagaatttggcctaactgtgtttaatgca
tcacaagacaagctttatgcccaggtgagatggggaaatgttcttgtacacctgctgaat
aaatttcgcaaaaagttgtctttgaaagttgactggcgccctttctatgatagtatgatt
caaacccactttacaaggaattcaggaccagagggatggaggataagacaacgacatttc
gagacgcttacttcccttgttcgttcttgtagaaggttcttcccaccaggttctgcccgt
gagatatggtctgagtttagttctttgctcgaaaatccatggcataattcagctttcgaa
ggttctggatttgtaagactcttcctgcctacaaacttggataatgaggacttctattca
cgtgagtggattgctgcatgtattcttcaatgggattctataccaaattgccagttctgg
aacagccaatgggctgctatcatggctcgtgttatcaaaaattacaaatccaaggactgg
gaggatcttttacctgagatattcagtcgatttatgaatatgtttgaggtaccagtagca
agtgggagtggatcatacccattttctatggatgtccctagaaatacgagatttctgttt
tccaatagatcgcaaactccgtctaaagccattgcaaagtcgattgtatatctgttaaga
cctggtagcttgactcaacaacactttgagaaattggtcaacctcttagagcagtattac
catccctctaatggtggtcgttggacatactctctagagaggtttttgtttcacttggtt
tatacattccagaaacgtttacaatgcgagaaagagagtgaacagattgaattttgtcta
ggaccatctgaaagggagtctttcgtgagaactgtcctgaagttaatcgatcgtggtcaa
tacagcaaaaatgaaaatctttcagaaacagtagctgctgcaacgtctatcttgtcttat
gtggagccctcattggttcttccctttttggtgtctcgttttcatatggcattagaaacg
atgacagcaacccatcagttaaagacagccgtcacatcagtggcgttttctggacgatca
ctatttttcatgtcattatctgcttcagcaatggaaatagatgatgctaatgatgctgat
atgtttcgtgatcttctgatgatatcactaaccaatgccttgcttgggatggatgccaat
gatccccccaaaaccttagcaactatgcaactaattggctccatattctctaatatggca
acattggatgatgatatggacaatttgtcattcatgcctgcagagcagttctcagaatgg
cttgatgagttcttatgccgccttttttctttattacaacacctggaacctagtagcgtt
ttaaatgaagatgttcattcacctgcaacatccggaacatttcttgtcgaagatggtcct
cagtatttttgcatgttggaaatattattcgggaggctttcaaaatccctgtacaaccag
gctatcaaaaaggtatccaagtttttgaaaacgaatattctacctggagctatatctgaa
gtcgggctgctttgttgtgcctgcatccattcaaatcctgagctggctgttgatcaactc
gttgaacctcttttatcttctgttatatcatctttgaaaggagttcccctcacgggattt
gggggaagtggaaatttcactggccagtcttcagataaggcacgagccacactttctcca
gcccttgaaacatcaattgattaccagttgaaggtgttgtcaattggaatcagttatgga
ggtccttcacttcttcattacaaggatcaatttaaggaagcaatacattttgccttcgaa
tccccatcgtggaaggttaacatagctggtgatcagatcctgcgggccctacttggaagt
ctgattctctattatcccgttgatcagtacaagtcggtttcgcaccatccttctctgacc
tcactggaggaatggataagtaataaggatttttcgaaagatgaagcctttaccggcccc
aagtggcatatccctagtgctgaagaaatacaatttgccaatgaactcttaaatctgcat
ctggaatcagctttagatgagcttttgaaaatatgccgagataacattcactctgatcca
ggaaatgaaaaagaccacttgaaagtgacacttttgcggatcgactcttcattacaaggc
gttctgtcatgtttgcctgattttgttccatcttttaaaaacggaaatgttgagaatccg
cctttcttaattgctggagccacggggtctagtgttggtggtactggattgcgtgaaaaa
gctgctaatatcatccatgtagcctccaaatacttgcttgagaaaaaatcagatgacagc
attcttttgcttcttctcatccgtattattgaggctttggggaattatggtagttctgaa
tatgaagagtggactaaccataggcaggcatggaaattggaatctgtggccataatagag
cctccagttaactttattgtaccgtcacattccaatgggaagaaaaggccacgatgggct
ctcattgataaagcatacatgcacaatacatggagaacatcacaattatcataccatttg
tttcgtacaagtaaaaatgtatctccttcagaaaatgtgaatgtgttgatggatgatctt
cttaatttatgtgtgcatagctatgatactgttcgcactcttgctgggagatcacttgtg
aaattgattaaacgttggccatctctgattgccaagtgtgtgcttactcttactgaaaac
ctgcgaagtgcctcctcaccagaatataaagttttaggttcttgtgctgtgcttggaact
caaactgttctcaagcatcttacattggatccaaaatctttctcatcattccttcttgga
attcttttgagttctcatcatgaatccttgaaatcccagaaagccctcaatgagcttttt
gtcaaatacaacatctattttgctgggatctctagaaacattttgcgtaaatctgaggat
cattctgggacagactttgcagctttggtttctgagatcagctctatgggttttgagtct
actaatttgcattggaggtataacttgatggccaacagggttctactgttgctggctatg
tcatctagaaatgagtccaatttggcatcaaagattctcagtgaaaccgctggtcatttt
ctaaagaatttaaaaagtcaacttccacagacaaggatactagcaatctcggctctgaat
atgttactgaaagaatcaccttatagactctcagccgaggaacaatctgttgctacaggg
agttcacatgagaatgccaagtcctcacttgaagggacattaagtaatatatttcaagaa
gaagggttctttagcgacactttcgacagcctatcaaatgtccacatcataagtgacact
gataactcgtcttctagaggcggccatgggaattcatcatttcaaagtttagcagataaa
tccatcacccgcttctactttgacttttcatcttcatggccccgtacacctacatggata
tctttatttggaaccgatactttttattcaagttttgctcgcatattcaaacgtttagtt
caagaatgtggtgttgcggtagtactgtcactaaagggtgcactagaggagttcgctaat
gctaaagaacggtctaaacagtgtgttgcagccgaggcttttgcgggtttgctgcatgct
gatgtttttgggcttgaggaagcttgggatagttggatgatggccctattgcagaatatc
cttcttgcaccatcagttgaatcggttcctgaatgggctggttgtatacggtatgcagtt
acgggtaagggtaaatatggtacaagagtgccacttctaaggcaaaggatattcgattgt
ttgatcgaaccgttacctcagacagtaaccaccactgtagttgccaagcgttactctttc
ctttctgctgctttgatagaagtatctcccctgaggatgcctttatccgaaattcagctc
cattataaactactagaggagttgcttgataaaatgagccatcccactgctcatgttagg
gaagccattgctattgcactttctgtgttgtgctctaatatccgattgcatgaatccgtt
aacaaagattcttcacctgagaatggcaagaatttagtaaatggaaaacatggtgatggt
tggaatcagtatttacaagaacgagcgtccgaactcgtggtttcaattcaaaacgccaat
ccttcagacaattctgagagtttagcagagacaaacactgtttctgggtcagatagtaac
tcaacagacgatgttcaatggatggaaacgttgtttcattttatcatttcgttgatgaag
tctgggagatctgccttcctgctggatgttcttgtggggttcctttacccggtgatctct
ttacaggaaacatcaaataaagatttgtcaacattggcgaaggcagcttttgagttgtta
aaatggagaatatttccggcagctcatctccgaaaggcggtagccatacttttatcttca
gcagaagaccctaactggcggaccagatctgcaactctgacttttctgcgcagctttatg
tacaggcacaccttcatactttcaaatgatgaaaagcagaagatctggaaaacagttgag
atattacttacagataaccaagtggaggtaagggagcatgcagcggcagttttagctggc
ctaatgaagggtgaggatggagaactatcaaaagacttccgtgaaagggcttatagcgag
gcgataaagcttcaaaagagaagaaaacagagaaactcaagtgcaggtccttccgttgct
tccatacatggttgtgttctttctctggctgcttgcgtgttgtctgttccttatgatatg
cccagatggttgcctgagcatgctaccttattggcccgctttgttggggaaccatcacct
atcaagtccactgtcacaaaagcagttgcagaatttcgccgcacccatgcagatacttgg
agtgttcagaaagattcattcacagaagaacagcttgaggtgttggcggatacatcgtct
tcatcatcttattttgcttaa
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integrated database retrieval system