Erigeron canadensis (horseweed): 122602552
Help
Entry
122602552 CDS
T07610
Name
(RefSeq) tryptophan synthase beta chain 2
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00260
Glycine, serine and threonine metabolism
ecad00400
Phenylalanine, tyrosine and tryptophan biosynthesis
ecad01100
Metabolic pathways
ecad01110
Biosynthesis of secondary metabolites
ecad01230
Biosynthesis of amino acids
Module
ecad_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
122602552
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
122602552
Enzymes [BR:
ecad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
122602552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
122602552
NCBI-ProteinID:
XP_043631090
LinkDB
All DBs
Position
6:complement(32138378..32141740)
Genome browser
AA seq
498 aa
AA seq
DB search
MSQSLSLSVIQSSNLSFKGEGIKHKYLSFNANRNHLNFSFREKGKTTMSLSPRAAPTEIP
THWYNIIADLPIKPPPPLHPKTHAPLQPQDLSHLFPDELIKQEISSERFIAIPDEVVDIY
RLWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNTAVPQVWYNAQQGVKNIVTE
TGAGQWGSSLAFACSLFGLNCEVWQVRASYDQKPYRKLMMQTWGATVHPSPSNITESGRK
ILEMDPSSPGSLGIAISEAVEMAALNEDTKYCLGSVLNHVLLHQTVIGEECIKQMEALGE
TPDVIIGCTGGGSNFAGLCFPFIREKLKGKINPLIRAVEPTACPSLTKGVYAYDYGDTAG
MTPLMKMHTLGHDFIPDPIHSGGLRYHGMAPLISHLYELGFMEAIAIPQIECFQGAIQFA
RTEGLIPAPEPTHAIAAAIREALQCKESGESKVILMAMCGHGHFDLPAYEKYLQGSMVDL
SFSEDRIQVSLANIPHLG
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatctctttctctttcagtcattcagagctcaaatctttctttcaaaggtgag
ggaataaagcataaatatttatcatttaatgcaaatcgcaatcatttgaacttctcattt
cgggagaaaggaaaaacgactatgtctctcagtccacgtgctgcaccaaccgaaatccct
acgcattggtataacatcattgctgacctacccatcaaacctcccccgcctttgcatcca
aagacacatgcaccattacaacctcaagacctgtctcatctctttcctgatgagttgatt
aagcaagaaatcagcagtgaacgattcattgcgattcctgatgaagttgttgacatctac
aggctttggcgtcctacccctctaataagagccaagaggttggagaaactacttgataca
cctgcaagaatttattacaagtatgaaggtgtgagtccagccgggtcacacaaaccaaac
accgctgttcctcaagtttggtataatgcacaacaaggtgtcaagaacattgtcaccgaa
actggtgctggtcaatggggaagttctttggcatttgcttgcagcctatttggtctcaat
tgtgaagtgtggcaagttcgagcttcttacgatcagaaaccatatcggaaactaatgatg
caaacttggggagctacagttcacccttctccttccaacattactgaatcgggtcggaaa
attcttgaaatggatccatcaagtccgggtagtttgggaatagcaatttctgaggctgtt
gagatggcagctcttaatgaagacaccaagtactgtttaggtagtgttctgaatcatgtt
ctgttacatcagacggttattggggaagagtgtattaaacagatggaggcattaggggag
acccctgatgtgatcattggatgtacggggggtgggtcgaattttgcagggctttgtttt
cctttcatacgagaaaaacttaaagggaaaatcaaccctcttatacgagccgttgagcct
acagcttgcccttctctgacaaaaggtgtttatgcttatgattatggcgatactgctgga
atgactcctttgatgaaaatgcatacacttggtcatgacttcattcctgaccctattcat
tctggaggattgcgttatcatggtatggcgccactgatatcacatctctatgaattgggt
ttcatggaagcaattgcaattccacagattgagtgctttcaaggggcgatacagtttgcc
cggacagaaggactgataccagcacccgagcccacacatgccatagctgcagcaatacgg
gaagctcttcaatgcaaagagagtggagaatcaaaagttatcttaatggcaatgtgtgga
catggccattttgaccttcctgcttatgagaagtatttgcagggttccatggttgatttg
tctttctcggaagacaggatacaagtttctcttgctaatattccacatttgggctaa
DBGET
integrated database retrieval system
