Erigeron canadensis (horseweed): 122602565
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Entry
122602565 CDS
T07610
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122602565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecad03032
]
122602565
Enzymes [BR:
ecad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122602565
DNA replication proteins [BR:
ecad03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
122602565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DUF7792
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
122602565
NCBI-ProteinID:
XP_043631104
LinkDB
All DBs
Position
6:complement(31595691..31605130)
Genome browser
AA seq
1479 aa
AA seq
DB search
MEERQKRKSRGAEAEKRAEALRKLKTLREGGVTEPGERYTIKFDEPIYDTVDDDEYQSLV
AKRQKDYKSFIVDDDGLGYVDEGQEVDWTQSGVVPSSEEEYSEDENKKKQPKKKKKENNN
VRKPSFEAASALMGKQRISNLFTSAVFNKNVNKANNAVSCDSILDDVLAEFAPDENDKEK
RRRGNKKPGVKVESLSVVQGNEDDVSVNGFSAFENEVVFEENKEVIEMNKDSGDVVEALK
DESEVKVEKVVKADQVRTLNAKVKEEKDPTFSATAGLQTVKGLNLNSEVESVLSSDGKHP
FVVNSDGSMPFYMLDAYEEAFGANAGNIYLFGKVKTGRTYESCCIVVKNMQRCVYAVPNG
SVFEESTIVKLEESKMSPADFHTKLHEMASALKTNIAEQLLDRNVSNFSMKPVKRNYAFE
RSDIERRANYVLKISYPFKDPPLPADLKGQTFCALLGTHSSALELFLIKRKIKGPSWLSV
SKFSSRSTSQRVSWCKFEVTIDCSKDIKVATNPENTGEIPPVVVTAINLKTIINQKQNTN
EIASASVICCHKAKIDTPMLASEWTRPGMLSHFTVVRKLEDGLFPMGFSKEAADRNSKAG
SDIISMESSERALLNRLMIELHKLDTDILVGHNISGFDLDVLLNRVKVSKVPNNMWSKIG
RLKRSEMPRLNKGSTVFGSGASPGIMSCIAGRLLCDTFLCSRDLLKEISYSLTELAKTQL
NKNRKEIAPHNIPQMFQSSQSLMELIEIGETDAWLSMELMFHLSVLPLTRQLTNISGNLW
GKTLQGARAQRVEYLLLHAFHAKKFMVPDKFYSPKESKVAKRKSDDPEEKVVNDLGVNDE
IENEPVKSKKAPSYAGGLVLEPKKGLYDRYILLLDFNSLYPSIIQEYNICFTTVDRSQGG
LVPCLPSSKTTGVLPELLRNLVERRKNVKEWLKTATGLKYQQFDIQQQALKLTANSMYGC
LGFSNSRFYAKPLAELITQQGREILQKTVDLVRDSLNLEVIYGDTDSIMIYTGLDDINKA
KSIAVNVIREVNKRYKKLEIDLDGLYKRMLLLKKKKYAAVKEQIRDGKVYKVIERKGLDM
VRRDWSLLSKETGDFCLEQILSELSCEEVVESIHNKLRKVQEEMRNGEIALEKYIITKTL
TKPPEAYPDARSQPHVEVALRLRKLGYTSGCSAGDTVPYIVCCEQGNGSSSSAGIAQRAR
HPDELMKDNENLMIDIDYYLAQQIHPVVSRLCASIEGTSPSVLADCLGLDPSKFQSKSIE
VANNDHAGSAIYLKDDEERYRGCEPLILSCPGCSGTFDCPSVLSYIRTVILEKSTDLDPS
SNNSFWHKLCCPKCQVEVPPVSIANQVKRRAESFISTYYKGLMTCDDETCNYTTRSLNLR
VVGDSERGTVCPNYPRCNGRLVRQYSEADMFKQLSHFCYLLDADRCINKVDAKFRTSVEK
EVVRITPSVEIALMAAQKIRDRCDYGWVNLPDLFDFSTI
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atggaagagagacagaaaagaaaatcaagaggagccgaagccgaaaaacgcgctgaagct
ctccggaaactcaaaaccctaagagaaggcggagtaaccgaaccgggcgaacgatacacg
attaaattcgacgaaccgatttatgacacggtagacgacgacgagtaccaaagcttagta
gcaaaacgtcaaaaggattacaaatcatttatagttgatgatgatggattaggttatgtt
gatgaaggacaagaagtggattggactcaatccggcgtcgttccgtcttccgaagaagag
tattcggaagacgaaaataaaaaaaagcagcccaaaaaaaagaaaaaagaaaataataat
gttagaaagccttcctttgaagctgcttctgctttgatgggtaagcaacggatatcgaat
ttgtttacgtctgcggtttttaataagaatgttaataaggcgaataatgcggtttcttgt
gatagtattcttgatgatgttttagctgaatttgcgcctgacgagaatgataaggagaaa
aggaggagagggaataagaaacctggggttaaggtcgagagtttgtcggtggttcagggt
aacgaggacgacgtatcggtgaatggtttttcggcgtttgagaatgaggttgtgtttgaa
gagaataaggaggtgattgagatgaataaagattcgggtgatgtcgtcgaggcgttgaag
gatgagagtgaggtgaaagttgagaaagtggtgaaggcggatcaagtgaggacgttgaat
gcgaaagttaaagaggaaaaggatcctacttttagtgcaaccgcgggtttgcagacggtt
aaaggtttgaatttgaatagtgaggttgagtcggttttgagttcggatggaaagcatccg
tttgtggtgaattctgatgggtcgatgcctttttatatgctcgatgcttatgaggaggcg
tttggtgcgaatgccgggaatatttatttgttcggaaaggtcaaaactgggaggacgtac
gaaagctgctgtatagttgtgaagaatatgcaaagatgcgtatatgctgtccccaatggt
tctgtatttgaagagtctaccattgtgaagcttgaagagtcaaaaatgtcacctgcagat
tttcacactaagcttcatgagatggcatctgcattaaagacaaacatagcagagcagttg
cttgacagaaatgtctcaaactttagcatgaaaccagtcaagaggaattatgcatttgag
agatccgacatagagcgcagagcaaattatgtacttaaaatcagttatccgtttaaggac
ccaccacttcctgcagatcttaagggacagaccttctgtgctctgcttggaacacacagc
agtgctttggagctttttcttattaaaaggaaaataaagggaccctcgtggctatcagta
tcaaagttttctagccgttccacttctcagagagtaagctggtgcaaatttgaggttact
attgattgttcaaaggacattaaagttgcaactaacccagaaaatactggagagattcct
cctgtggttgttactgcaatcaatttgaaaactataataaaccaaaaacagaatacaaac
gaaattgcctctgcatctgtcatttgctgtcataaggctaagattgacacccccatgtta
gcctcagaatggacaagacctggaatgcttagccattttactgttgtgcgtaaacttgag
gatggcttgtttccgatgggatttagtaaagaggcggctgatagaaattcaaaggctgga
tcagacatcattagcatggagagcagtgaaagagctctattaaaccggttgatgattgaa
ttacacaaattggatactgatattctcgttggccacaacatatctggctttgacttggat
gtgcttctcaacagagtgaaggtgtctaaagttcctaacaacatgtggtccaaaattggg
cggctcaagcgctctgagatgcctagactcaataaaggaagcactgtttttggatccgga
gcaagtccaggaattatgtcttgcattgcaggccgccttttatgtgacacctttttgtgt
tcacgtgacctgctaaaggagattagttattcattgactgaacttgcaaagacgcaactg
aataagaaccgaaaggaaattgctccacacaatattccccagatgtttcagagctctcag
agcctaatggaacttattgagattggggagacagatgcatggttgtcaatggaacttatg
tttcatttgagtgttctacctctaacacgtcaattgaccaatattagtggtaatctttgg
gggaaaactcttcagggagctagagctcaaagagttgagtatctcttgttgcatgcattc
catgctaaaaaatttatggtaccagacaagttttattcgccaaaggagagcaaagtagca
aagcgtaaatcggatgacccggaggaaaaagtagtcaatgatttaggggtgaatgatgag
atagaaaatgagcctgtaaaatccaaaaaagcaccgtcgtatgcaggtggattagtgttg
gaacccaaaaaaggtttatatgatagatacatattacttttggatttcaacagtctctac
ccttctatcatccaggagtataatatctgctttacaacagtagatagatcccaaggtggt
ttagttccctgcttaccatcttcaaaaacaactggagttctacctgagctattgagaaat
ttggttgagagaaggaaaaatgtaaaagagtggttgaagactgcaacgggtctcaagtac
caacagtttgatatacaacagcaagcactgaagctaacagctaatagtatgtatggatgc
ctgggtttttctaattccaggttctatgcaaagccacttgcagaacttattacgcaacaa
gggagagagattttacaaaaaactgttgatcttgttcgggacagtttaaacttggaggtt
atatatggtgatactgattcaataatgatatataccggacttgatgatataaacaaagcc
aaatcgattgcagtgaatgtcatcagagaggtaaacaagagatacaagaaattagaaatt
gatcttgatggtctatacaaaagaatgctgttacttaaaaagaagaaatatgcagctgtg
aaagagcaaataagagatgggaaagtctacaaggttatagagcgaaaaggtcttgatatg
gtacgacgtgactggagtttgctatcaaaggagacaggagatttttgcctggaacaaata
ttatctgagctgtcatgtgaggaagttgttgaatcaatacacaacaaactcaggaaggta
caagaggaaatgaggaatggagaaatagctttggagaaatatatcattacaaaaacatta
acaaaaccacctgaagcctacccagacgctagaagtcaacctcatgtggaagtagcactt
aggttgcggaaactaggatacaccagtggttgttctgctggtgatacagttccatatata
gtatgctgtgagcagggtaatggttcgagctcatcagcagggattgctcagcgtgcaaga
catcctgatgaactgatgaaagataatgaaaacttgatgattgacattgactattatctg
gcacagcagatacatccagtcgtatcacgtctctgtgcatcaatcgagggtacaagtcca
tccgttttggctgattgtttaggacttgatccttccaagtttcaaagcaaatcgattgaa
gtcgcaaacaatgatcatgctggctcagctatctacctgaaagatgacgaagagagatac
cgtggttgtgagcctttaattttgtcatgtcctggctgctctggtacttttgactgtcca
tctgttctcagttacatacgcacagtaatccttgaaaagtcaacggacttggatccgtca
tccaacaacagcttctggcacaaattgtgttgccctaaatgtcaagttgaagttcctccg
gtttcaatagccaaccaggtaaaaagacgagctgaatcattcatatcaacatactacaag
ggattaatgacgtgcgatgatgaaacctgcaactatactacaagaagtttaaacttgcgt
gtcgttggggactccgagagaggaactgtatgtccaaattatcctcgttgtaatggtcgt
cttgtgagacagtattctgaggcagatatgttcaagcaactatctcacttctgttatctc
ctggatgctgatcggtgcattaacaaggtcgacgcaaagttcagaacttcagtggagaaa
gaggttgtcagaataacaccttctgttgaaatagcattaatggcagcacagaagatcagg
gatcggtgtgattatggttgggtgaacttacccgatttgtttgacttctctacaatctag
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integrated database retrieval system
