Erigeron canadensis (horseweed): 122602605
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Entry
122602605 CDS
T07610
Name
(RefSeq) ubiquitin C-terminal hydrolase 13-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122602605
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecad01002
]
122602605
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122602605
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122602605
Peptidases and inhibitors [BR:
ecad01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122602605
Ubiquitin system [BR:
ecad04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122602605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
pP_pnuc_2
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
122602605
NCBI-ProteinID:
XP_043631139
LinkDB
All DBs
Position
6:complement(38033082..38045931)
Genome browser
AA seq
1116 aa
AA seq
DB search
MTLMTPPPIDAEEEEMLVPHSDFAPVEGPQPMEVAPAEAASAVEAPTVDDPPSARFTWTI
ENFSRVNSKKLYSDVFFVGGYKWRVLIFPKGNNVDHLSMYLDVADSSSLPYGWSRYAQFS
LAVVNQIHNKFTIRKDTQHQFNQRESDWGFTSFMPLSELYDPSRGYLLNDTCIVEADVAV
RKVVDYWSHDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGS
IPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTV
VEGTIQQLFEGHHMNYIECINVDYKSTRKESYYDLQLDVKGCQDVYASFDKYVEVERLEG
DNKYHAEQHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDR
EDGKYLSPQADRTVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDL
KRALDEQYGGEEELPQANPGFNNSPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEH
LRIRLKKEQEEKEQKRKEKAEAHLYTIIKVARDEDLREQIGKDIYFDLVDHDKVRSFRIQ
KQTSFTLFKEDVAKELGIPVQNQRFWLWAKRQNHTYRPNRPLTPLEEAQSVGHLKEVSNK
ANNAELKLFLEVEHGPDLRPIPPPEKTKEEILLFFKVYDPLKEELRYVGRLFVKGTGKPI
EILARLNELAGFAPDEEIELFEEIKFEPNVMCEHIDKKLTFRGSQLEDGDIICLQKSLKV
ENTETCRYPDVPSFLEYVHNRQVVRFRSLEKPKEDEFSLELSKLNNYDDVVERLARHLNL
NDPSKIRLTSHNCYSQQPKPQPIKYRGVEHLSDMLAHYNQTSDILYYEVLDIPLPELQGL
KTLKVAFHHATKDEVVIHTIRLPKQSTVGDVINDLKTKVELSNRDAELRLLEVFYHKIYK
IFPLNEKIENINDQYWTLRAEEVPDEEKDLGPQDRLIHVYHFTKDTAQNQQVQNFGEPFF
LVIREGETLAEVKVRIQKKLQVPDEEFSKWKFAFLSLGRPTYLQDSDIVSTRFQRRDVYG
AWEQYLGLEHSDNTPKRAYAANQNRHTFEKPVRIYN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgactctcatgactccccctcccattgatgcagaagaggaagagatgctagttccacat
tccgatttcgctcccgtggaaggccctcaacctatggaagttgctccagcagaagctgct
agtgctgttgaagcacctactgtcgacgatccaccatcagcacggtttacatggactatt
gaaaatttctccagagtgaattcgaagaagctgtactctgatgtgttctttgtcggtggt
tataaatggcgagttcttatatttccgaaaggaaacaatgttgaccatctgtctatgtat
cttgatgtcgctgattcgtcatctctgccttatggttggagtagatatgctcaattcagc
ttagcagtggttaatcaaattcataataagttcacaattagaaaagatacacaacaccag
ttcaatcaacgagagagtgattggggtttcacttcatttatgcctctaagtgagttatat
gatcccagtagaggctatcttctgaatgatacatgtatagttgaagctgatgtggcagtc
cggaaggttgtcgattactggtcacatgattcaaaaaaggagactggttttgtcggcctt
aaaaatcaaggagctacttgctatatgaactccctgctacagacattatatcacattcct
tattttaggaaggctgtgtatcatatgccaacaactgagaatgatatgccatcagggagc
attcctttggctttgcagagtttattctataagcttcaatacagtgacacaagcgtcgcc
acaaaggagttgacaaaatcttttggttgggatacatatgattcttttatgcagcatgat
gttcaagaactcaatcgagttctctgtgagaagctggaagacaaaatgaagggaactgtt
gtggagggtacaattcagcagttatttgaaggacaccatatgaattatattgaatgcata
aatgttgactacaaatcaacaagaaaggagtcttattatgatcttcagcttgatgttaaa
ggatgtcaagatgtatatgcctcttttgacaagtatgtggaagttgaaaggcttgaaggt
gacaacaaatatcatgctgaacaacatggtttacaggatgcaaagaagggtgtgttgttt
attgatttccctcctgttctccaactccagttgaaacgttttgaatatgacttcatgcgt
gacacgatggtgaagattaatgatcgttatgagttcccactgcaacttgatcttgataga
gaagatggaaaatatttatctccccaggcagacagaactgttcgcaatctttacactctt
cacagtgtattggttcacagcggtggggtacatggcggacattattatgcctatatccga
ccgacactttctgatcaatggtttaagtttgatgatgaacgtgtgaccaaagaagacttg
aagagggcattggatgaacagtatgggggcgaggaggagctacctcaagcaaatcctggg
ttcaataactccccgttcaaatttacaaagtattcaaatgcatatatgcttgtgtatata
cgtgaaagtgacaaggataaaataatatgtaatgtggacgagaaagatatagcggagcac
ctgagaatacggttgaagaaagagcaagaagaaaaagagcaaaaaaggaaggagaaagca
gaggcacatttatatacgattattaaggttgctcgagatgaggaccttcgtgaacagata
gggaaagatatatattttgatttagtggatcatgacaaagttcgtagcttccgcatccag
aaacagacatcttttacccttttcaaggaagatgtagctaaggaattgggtataccagtg
caaaaccaacgtttctggctatgggcaaagcgccaaaatcacacttatcgaccaaatcgt
cccttgacgcctctagaagaagctcagtctgttggacacttgaaagaggtatcgaataag
gcaaacaatgctgagcttaagttgtttctggaagtagaacatggaccggatctacgccca
attcctccacctgagaagactaaggaagagattttacttttctttaaagtctatgatcca
ttgaaggaggaacttcggtatgtagggcggctttttgtgaagggtactggaaagccaatc
gaaatattggcaaggctgaatgagctggcaggctttgcacctgatgaagaaatcgaatta
tttgaggaaattaagtttgaacccaatgttatgtgtgaacacattgacaagaagctaact
ttccggggtagtcagcttgaagacggggacatcatttgtcttcagaaatctctcaaggtc
gaaaatacagaaacatgtcgctatcctgatgttccgtcttttctggagtatgtgcacaat
cgacaggttgtacgatttcgttcactggagaagcccaaggaggatgagttctctctggaa
ttgtcaaaactgaacaattatgatgatgttgtagaaagacttgcccgccatctaaattta
aatgatccatctaaaattaggcttacatctcacaactgctactctcagcaacctaaacca
cagccaattaagtatcgtggtgttgaacatctctcagatatgctggcccactataatcag
acttcagatattttgtattatgaagtactggatatccctttgccagaattgcaaggcctg
aaaactctgaaagttgcatttcatcatgctactaaagatgaagtggtaatacatactatc
agattgccaaagcaaagcactgtgggggatgtgatcaatgatctcaagacaaaggttgag
ttatctaatcgagatgcagagcttcgattacttgaggttttctatcacaaaatctacaag
attttccctctgaatgagaaaatagagaatatcaatgatcaatactggacattacgtgct
gaggaggttccagatgaagaaaaggatctgggtcctcaggatcgcttgattcatgtttac
cattttacaaaagacacggctcaaaaccagcaggtccaaaacttcggggaaccattcttc
ttggtcattcgtgagggtgagacgttagctgaagtgaaagtacggatacagaagaagtta
caggttccagacgaggagttttcaaagtggaagtttgcatttttatctttgggccgtccg
acatatctccaggactcggatattgtctccacccgatttcagagaagagatgtttatggg
gcctgggaacaatatttgggattggagcactctgacaatacacccaagagggcatatgct
gcaaatcagaaccgtcacacatttgagaaaccggttagaatttacaactaa
DBGET
integrated database retrieval system
