KEGG   Erigeron canadensis (horseweed): 122602667
Entry
122602667         CDS       T07610                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03020  RNA polymerase
ecad03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    122602667
  09124 Replication and repair
   03420 Nucleotide excision repair
    122602667
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecad03021]
    122602667
   03400 DNA repair and recombination proteins [BR:ecad03400]
    122602667
Transcription machinery [BR:ecad03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     122602667
DNA repair and recombination proteins [BR:ecad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      122602667
SSDB
Motif
Pfam: RNA_pol_Rpb4 L_PA-C-like
Other DBs
NCBI-GeneID: 122602667
NCBI-ProteinID: XP_043631195
LinkDB
Position
6:24921718..24925029
AA seq 139 aa
MSAEEEENAAELKIGEEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPLNHVSQVFEKSLQ
YVKRFSRYKNPDAVRQVRELLSGYQLAEFELCVLGNLCPETVEEAIAMVPTIKSRGRGHD
DDEAIEKMLNDMSMIKKFE
NT seq 420 nt   +upstreamnt  +downstreamnt
atgtctgcggaagaggaagaaaatgctgccgagctcaaaataggcgaagagtttttgaag
gccaagtgtttaatgaattgtgaagtctcgttgattcttgaacacaaatatgaacagctt
cagcagatgtctgaagatccgttgaatcatgtttctcaagtgtttgagaagtcactgcaa
tatgtgaagcggttcagtcgctacaagaatccagatgctgttagacaagttcgagaacta
ctgagtggataccagttagcagaatttgagctttgtgttcttggaaacctttgccctgaa
actgtggaggaagctattgctatggtacccactatcaagtccagaggacgaggacatgat
gatgatgaagctattgagaaaatgctgaacgacatgtctatgataaagaaatttgagtag

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