Erigeron canadensis (horseweed): 122602682
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Entry
122602682 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3-like isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122602682
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122602682
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122602682
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-ANAPC11
zf-C3HC4_2
zf-C3HC4
Beta-prop_SPT8
zf-Nse
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
122602682
NCBI-ProteinID:
XP_043631205
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Position
6:complement(7795279..7804122)
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AA seq
606 aa
AA seq
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MDNYNIVIEIGDEDNDDETEEEEEEEDNDSEEEEEEEVATVESRVSPGPVKGKFMSQDIN
ENNKNGSNDNEEFDASGIDGLCCPICMDVWTNGGLHQICCLPCGHIFGMSCIKKWLQQRR
SSGKCPQCNKRCTLKDIRVLYASRLCVADAALQKKVRSLEAKCASLEKKNVDCCKKEVRS
QEREADLHLEVERLTKKAKCLEGLLEDERRESQRLLTANEDYQRRVISGNGMGNGSGGLV
YSTIFTLQGLCVGTNAVHRTKGFPSIYLFFPREFQVDGARCFDMDASGELMIVARAGMGG
TNLLTKISLAAPDEREDIQLPGNTKAVMSLCVRPCSRLALLASLGRKLSVVSTESSNTVL
TYDLPAPAWSCSWDIDSSYHVYTGLQNGTVLAFDIRQTRIPLESRTGLSGNPVHTVISVA
PGPSLPSGTKALLTASQIGICEWNFGSGEERPYLIPETNNQGVCISLAHTGGDDFVASFR
PKIEMPTAVGVSQSPPTPSTSCGTEGSHIFYKRTGMQSYLKTGSFLSQMDSIRLPRSTIV
NKPYHSPMFVSANDVTAELVLYDMSKLVVAQRLKTFARPVRDVRCTHIWNTCVLGCVSGN
VVQLFS
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggacaattataatatagtgattgaaattggagacgaagataatgatgacgaaaccgaa
gaagaggaggaggaagaagataatgatagtgaagaagaagaagaggaggaggttgcgacg
gttgagtctagggtttcaccgggtccggttaaaggaaagtttatgagtcaggatattaat
gaaaataataaaaatggtagtaatgataatgaggaatttgatgcatctgggattgatggt
ttgtgttgtcctatttgtatggatgtttggactaatggtggtctacatcaaatttgttgt
cttccttgtgggcacatatttggtatgtcatgtattaaaaagtggcttcaacaacgtcga
agttctgggaagtgtcctcaatgcaacaaaagatgtacactgaaggatatcagagtactt
tatgcgtcacggctttgtgttgcagatgctgcattacaaaagaaagtgcggtcactcgaa
gctaaatgtgcatctcttgagaagaagaatgttgactgctgcaagaaagaagttagatcc
caggaaagagaagctgatttgcatcttgaagtggagaggctaacaaagaaagcaaaatgt
ttagaggggttactagaagatgaacgaagagagtcacagcgtttgttgaccgccaatgag
gactatcaaagaagagtgataagtggaaatggcatgggcaacgggtctggaggtcttgtc
tattcaacaatatttactctccaggggctatgtgtaggtaccaatgcagtacatcggact
aaggggtttccatcaatctaccttttttttccgagagagttccaggtagacggagctcga
tgttttgatatggatgcttctggtgaacttatgatagtagctcgagctggaatgggagga
acgaatctacttacaaaaataagtttggcagctccagatgaaagagaagatattcagctt
cccgggaatacaaaagctgttatgtctctttgtgttagaccttgtagccggcttgcactg
cttgcttctttggggaggaagttatcagttgtcagtacagagagcagcaacactgttctt
acctatgatttgccggctcctgcttggtcatgctcatgggatattgacagttcatatcat
gtttatacaggattacagaatggtactgttttggcctttgatatacgtcaaaccaggata
cccttggagtccaggactgggttgtccggcaatcccgttcacactgtgatctctgttgca
ccagggccgtctcttccttctggcacaaaagcccttctgactgcctcacaaattggtata
tgtgagtggaactttggtagcggtgaagaaaggccatacctgattcctgaaacgaataac
caaggagtttgtatatctcttgcgcacactggcggtgatgactttgttgcttcatttcgt
ccaaagattgaaatgccaactgctgttggtgtatctcaatcacctcctactccttccacc
tcttgtggaactgagggttctcatatattttacaagaggaccgggatgcaaagttatcta
aaaactggatccttcttgtcccaaatggatagcatacgactaccaagatctaccatcgtt
aacaaaccataccatagccccatgttcgtttctgcaaatgacgtgacggctgagttggtg
ttgtatgacatgtcaaaactggttgtggctcaacgtcttaaaacttttgcaagacctgta
cgagatgtgaggtgtacacatatttggaacacttgtgtactggggtgtgtaagtgggaat
gtggtacagcttttttcttga
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