Erigeron canadensis (horseweed): 122602805
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Entry
122602805 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2-like isoform X1
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122602805
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122602805
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122602805
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
DUF3432
zf-C3HC4_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
122602805
NCBI-ProteinID:
XP_043631336
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All DBs
Position
6:34027097..34032826
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AA seq
479 aa
AA seq
DB search
MGAKTSREDDASYSGASYQPSSSFTRNQYGNNNPPPQPSSYPSRYEQNYPTPYEQSYPVQ
EAYPPPQHTPAPAPVVATPAPVSASAYGGQPHRPQSKFDRRYSTIADSYHSLEQVTEALA
RAGLESSNLILGIDFTKSNEWTGSRSFQRKSLHHIGDGMNPYQQAISIIGKTLAAFDEDN
LIPCYGFGDASTHDQDVFSFYPEERCCNGFEEVLSRYRELLPHLKLAGPTSFAPVIEKAM
TIVEDSGGQYHVLVIIADGQVTRSVDTERGRLSPQEQRTVDAIVEASKLPLSIVLVGVGD
GPWDTMKEFDDNIPSRSFDNFQFVNFTEIMTKNVPPIRKETEFALAALMEIPTQYKATIE
LSILGSRKGISPKRVALPPPVPSFSSSKPTHSTGFQGSQPYYDPNAPVTAVPYYAPSGVE
RTAPPMPVSTYENQLCPICLTNPKDMAFGCGHQTCCDCGETLKLCPICRKPIETRIKLY
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcaaaaacatcaagggaagatgatgcaagttacagtggtgcatcctaccagcct
tcttcctcgtttactcgtaatcaatacggaaacaataatcctccgcctcaaccgtcttcg
tatccgtcccggtacgagcagaattatccgacaccatacgagcagagttatccggttcag
gaagcgtatccaccaccacagcacactcctgcacccgcaccggtggttgcgactccagct
cctgtttctgcttcggcttatggaggtcaacctcatagacctcagagtaagtttgaccgg
cggtattccacgattgcagatagttaccattcgctggaacaggtgaccgaggctcttgca
cgtgcagggctcgagtcttctaaccttatactaggtattgatttcactaagagcaatgaa
tggacaggttcaaggtcttttcagagaaaaagtttacatcatattggagatggtatgaat
ccatatcaacaggcaatctccattattgggaaaaccttagcagcgtttgatgaagacaac
ttgattccttgttacgggtttggagatgcatccacacatgatcaagatgtcttcagtttt
tatcccgaagagaggtgttgtaatggattcgaagaagtcttaagtaggtacagggagcta
ctacctcatttaaagcttgcaggcccgacatcatttgcccctgtcattgaaaaggcaatg
actattgttgaagatagtggaggacaatatcatgtgttggttatcattgctgatgggcag
gtaacacgaagtgtggataccgaacgtggccgtttaagtccacaggaacaaagaaccgtg
gatgccatagttgaagcaagcaagcttccactgtctattgtactagttggagttggtgat
ggtccttgggacactatgaaggaatttgatgataatattccttctcgcagctttgacaat
ttccagtttgtgaacttcacggaaataatgaccaagaatgtacctccaattcgaaaggag
actgagtttgctcttgcagcactgatggaaattcctacccaatataaagcaactatcgaa
ctgagtatactaggcagtcgcaaaggaatttcccccaagagggttgcccttcctcccccg
gtaccatcgtttagcagctcaaaaccaacacattcaactggttttcaggggtcacaacct
tattatgacccaaacgctcctgttactgctgttccttattatgctccttctggtgtagag
cgcacggcaccacctatgccagtttctacttatgaaaatcagctatgccccatttgccta
actaatccaaaggatatggccttcggttgtggacatcagacgtgttgcgactgtggagaa
acactcaagctgtgccctatctgccggaagccaattgaaaccagaataaagctgtattaa
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