Erigeron canadensis (horseweed): 122602828
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Entry
122602828 CDS
T07610
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04142
Lysosome
ecad04144
Endocytosis
ecad05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122602828
04142 Lysosome
122602828
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122602828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122602828
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122602828
Membrane trafficking [BR:
ecad04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
122602828
Exosome [BR:
ecad04147
]
Exosomal proteins
Proteins found in most exosomes
122602828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
ASRT
Motif
Other DBs
NCBI-GeneID:
122602828
NCBI-ProteinID:
XP_043631366
LinkDB
All DBs
Position
6:41753617..41765246
Genome browser
AA seq
1702 aa
AA seq
DB search
MAAANAPITMKEALTLPSIGINPQFVTFTNVTMESDKFICVRETSPQNSVVIIDMNMPMQ
PLRRPITADSAIMNPISKILALKAQLPGTTQDHLQIFNIEMKAKMKSHQMPEQVVFWKWV
TPKMLGMVTQTSVYHWSIEGDAEPVKMFDRTANLSNNQIINYKCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLYSVDQQRSQALEAHAASFASFKVPGNENPSILISFATKSSNAGQVTS
KLHIIELGAQPGKPSFIKKQADLFFPPDFADDFPVAMQISHKYGLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTSEASSVGGFYAVNRRGQVLLATVNESTIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
SGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYVPDYLFLLQTILRSDPQ
GAVNFALMMAQMEGGCPVDFNTITDLFLQRNLIREATAFLLDVLKPNLPEHAHLQTKVLE
INLVTFPNVADAILANGMFSHYDRARIAQLCEKAGLYVRALQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSQEWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVEACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKAKNFLMEA
KLPDARPLINVCDRFGFIPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKFCEKRDPTLAVVAYRRGQCDEELINVTSRNSLFKLQARY
VVERMDGDLWEKVLNPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQDSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIQSIPRAVEFAYRVEEDAVWSQVAKAQLRDGLVSDAIE
SFIRADDATQFLDVIRAAEDDECYHDLVKYLLMVRQNTKEPKVDNELIYAYAKIDRLSDI
EEFILMPNVANLHNVGDRLFDEALYEAAKIIYAFISNWAKLAVTLVRLQQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRHEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAASTVMNHSPEAWDHMQFKDIIVKVASVELYYKAVHFYFREHPDLINDVLNVL
ALRVDHTRVVDIIRKEGQLPLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESINF
HDNFDQIALAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGD
RELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELAWLNNMIDFAFPYLLQFIREY
TGKVDELIKDKIEALKETKARENEEQDVIKQHNMYAQLLPLALPAPPGMGGGMGGGFAPP
PPMGGMGMPPMPPYGMPSMGSY
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagctaacgccccaatcactatgaaagaggcactcacgttgccgagcataggg
atcaatccgcagttcgttacatttacaaatgttacaatggagtcagataagtttatatgt
gttcgtgaaacgtcgcctcagaacagtgtggtgattattgatatgaacatgccaatgcag
ccgttgaggaggcctattactgctgattcggctattatgaatcctatttccaagattttg
gctttaaaagctcaactccctggcaccactcaggatcacttgcagatatttaatattgaa
atgaaagcgaaaatgaaatctcatcagatgcctgagcaggttgtattttggaagtgggtt
acccctaagatgttgggcatggtgacccaaacatcggtgtaccattggtcaattgagggc
gatgctgaacctgtaaagatgtttgatagaactgcgaatctatcaaacaatcagattata
aattacaaatgcgatccatctgagaaatggctggtgttgattggaattgcccctggctca
ccagagagaccacaattagttaaaggaaatatgcagctttattctgttgatcagcagcgg
agccaagctctagaagcacacgcagcatcatttgcctccttcaaagtccctggcaacgag
aatccttctattcttatttcttttgctaccaaaagctctaatgctggacaggttacatca
aagctgcatatcattgagctcggggcccagccaggaaagccttcttttatcaagaaacaa
gcagaccttttcttccctcctgattttgcagacgattttcctgttgccatgcagatatct
cacaagtatggcttgatttatgttatcaccaagctggggcttttattcgtgtatgacctt
gaaactgctactgcagtgtatagaaatagaattagcccagatccaatttttctgacttct
gaagcttcatcagttggtggcttttatgctgtcaacagacgtggtcaggtcttacttgcc
actgtaaatgaatcaacaattgtgccttttgttagtggacaattaaacaatctggagctt
gccgtcaatcttgcaaaaagaggaaatctacccggtgcagagaatttggttgttcaacgt
tttcaagaattgtttgctcaaacaaagtacaaagaggctgccgagctcgctgcagaatct
cctcaaggcattctccgtacgccagatacagtggcaaaatttcagagtgtaccggtacaa
tctggacagacaccaccattgttgcagtattttgggaccctcctaaccaaaggaaagcta
aatgcctttgaatcattggaactatctcgtcttgttgtcaatcaaaacaagaagaacctt
ttggagaattggttggctgaagacaagctggaatgtagcgaggaacttggggacctcgtg
aagactgttgataatgatcttgctttaaagatttatatcaaagctagggcaactcctaaa
gttgttgcagcttttgctgagcgaagagagttcgacaaaattttgatttactccaagcag
gttggatatgtgcctgattatttgtttctcttgcaaacaattcttcgatcagatccacag
ggagctgttaattttgctttaatgatggcccagatggagggaggatgtccagttgatttc
aatacgataacagatctttttcttcagagaaacttgatacgtgaggcaacggccttcctc
ttggatgtccttaagcccaatttgcccgaacatgctcacctgcaaaccaaggtcctcgaa
attaatctagtaacatttcctaatgttgctgatgccatattagcaaatggcatgttcagc
cactatgatcgtgctcgcattgctcaactctgtgagaaagccggtctatatgtcagagcc
cttcagcactacactgaactgccagatatcaaacgcgttattgtgaatacgcatgcaatc
gagccacagtctcttgtagaattttttgggacactatctcaggaatgggcactagagtgc
atgaaagatcttttgctggtcaatctgagaggaaatcttcagataatagtgcaggttgcc
aaagaatattgtgagcagctgggtgtcgaggcatgtatcaagctatttgagcaatttaag
tcctatgaaggtctttacttttttttgggatcatatttgagctccagcgaggatcctgac
atccacttcaagtacattgaggcagctgccaagacaggacaaattaaggaggttgagcgt
gtaacacgagaatcaaatttctatgatgctgaaaaggccaaaaattttctaatggaagcc
aaacttcctgatgcaaggccgttaatcaatgtgtgtgatcgctttggttttattcctgat
ctcactcactacctttataccaacaacatgctgcggtatatagaaggatatgtccagaag
gtcaatccagggaatgctcctttagttgtaggacagcttcttgatgatgagtgccccgag
gacttcattaaaggcttgattctatctgttcgttctttgcttccagttgagcctcttgtg
gatgagtgtgaaaagaggaatcgccttcgattgcttactcaatttttggagcatcttgtg
agtgaaggaagccaagatgtccatgtgcacaatgctttgggtaaaattattattgacagc
aacaacaaccctgagcactttcttaccaccaacccatattatgattcacgtgtcgtgggg
aagttctgtgagaagcgtgatcccacacttgctgttgttgcataccgtagagggcaatgt
gacgaagagcttattaatgtaacaagcaggaattctctttttaagttgcaagccagatat
gttgtggagagaatggatggtgatctctgggagaaggttcttaaccccgagaatgagtac
agaagacaactcattgatcaagttgtctctactgctttgcctgaaagcaagagtcctgag
caggtttctgctgctgttaaagcttttatgactgctgatcttccccatgagctaattgaa
cttcttgaaaaaattgttctccaagactctgcttttagtggcaattttaatttgcaaaac
ctgcttatcttgacagccattaaggctgatccatcacgagttatggactatattaataga
ttagataactttgatgggcctgctgttggagaggttgctgtggaagcacaattgtatgaa
gaagcatttgctatatttaagaagtttaacttaaatgttcaagcagtcaacgtgttgctg
gacaatatccaaagtattccacgggctgtggagtttgcataccgtgtcgaagaagatgct
gtatggagtcaggtggctaaagctcagctgagagatggactagtaagtgatgcaattgag
tcatttatccgtgccgatgatgccactcaatttttggatgttattcgtgctgctgaggat
gatgaatgttatcacgatttggtgaagtatctactgatggttaggcagaacactaaggag
cccaaggtggacaacgagctcatatatgcttatgcaaagatcgacagattaagtgacatt
gaggagttcatacttatgccaaatgtagccaaccttcataatgttggtgatcgtttgttc
gacgaggctttatatgaagctgcaaaaatcatatatgctttcatatctaactgggctaag
ctggcagtcacacttgtcaggctgcaacagtttcaaggtgcagttgatgctgctcgtaag
gcaaatagtgcaaagacatggaaagaagtctgctttgcttgtgtcgatgccgaggagttt
cgcttggcgcagatatgtgggctgaatattattgtacaggtggatgacctggaagaggtg
agcgagtactaccaaaatagaggatgcttcaatgagcttatatctcttatggagagtggt
ctggggttggaacgtgctcatatgggcatcttcactgagttgggtgtcctttatgccaga
taccgtcatgagaagttaatggagcatattaaactcttctcaactcgtctcaacattcca
aagttgatccgagcttgtgatgaacaacagcattggaaggaacttacctatttatatatt
caatatgatgagtttgataacgctgcctcaactgtcatgaatcattcccccgaagcttgg
gatcatatgcagtttaaagatataatagttaaagtggcgagtgtagagctatattacaag
gccgttcacttctatttccgagagcatccggaccttattaatgatgttctcaatgtcctt
gcactacgtgttgaccatacacgtgtggtggacattatacgaaaggagggccaacttccc
cttgtaaaaccttatatggttgcagttcagagcaacaatgtatctgctgtaaatgaggcg
ttgaatgaaatttatgttgaggaggaagattatgatagattgcgtgaatctattaatttt
catgataactttgaccagattgcccttgcacagaaaattgagaaacacgagcttcttgag
atgaggcgtgtggctgcatatatttacaagaaggcaggtagatggaaacagtctattgca
ttgtctaaaaaagacaaagtttacaaggatgccatggagactgcatcacaatctggggac
cgtgagctggcagaggagctgcttgtttatttcattgaacagggaaagaaggaatgcttt
gcttcatgtttatttgtttgttatgatctcattcgtccagatgttgctcttgagttagcc
tggctgaataatatgatagattttgccttcccatatctgcttcagtttatccgtgaatat
actggcaaagttgatgagctaatcaaggacaagatagaagcacttaaagaaacaaaggca
agggagaatgaagagcaggatgtcattaaacagcataacatgtatgctcaattattgcct
cttgcgctacctgcaccaccaggtatgggtggaggaatgggtggtggatttgctccacca
ccaccaatgggtggaatggggatgcccccgatgcccccgtatggaatgccttctatgggt
tcttattga
DBGET
integrated database retrieval system