Erigeron canadensis (horseweed): 122602829
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Entry
122602829 CDS
T07610
Name
(RefSeq) cytosolic endo-beta-N-acetylglucosaminidase 1
KO
K01227
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:
3.2.1.96
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
122602829
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
122602829
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_85
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
122602829
NCBI-ProteinID:
XP_043631367
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Position
6:complement(41940715..41949010)
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AA seq
708 aa
AA seq
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MLLNFVEKYIDRQTLITIHNIYTSIISLIFPKMTTTDSQPIFNPNIPSPPISYPIKTLED
LRLRTYFDSFHFEFNKSSVALRRQRDDDVMLPNRRRLMVCHDMEGGYTNDDKWIQGGNNA
DAYSIWHWYLIDVFIYFSHNLVTLPPPSWVNTAHLHGVKVLGTFIVEWAEGKLIAEQFLE
TTTIAEMYAERLSELAVALGFDGWLINMEVSLDIKKIPILKKFVSHLTQVMHSSMPGSIV
IWYDSITIEGQLIWQDQLNDKNKPFFDICDGIFMNYSWKEDYPRSSAAVAGNRKFDVYMG
IDVFGRGTYGDGQWTTNVALDVLKKDDVSAAIFAPGWVYETKQPPNFQTAQNRWWSQVEK
SWGISQTYPRVLPFYSNFDQGHGYHLSVDGSLVSDAPWNNISNQSFQPCLELSGDAATET
IQAFVDFKEASYSGGGNITFKGVLEDNAYVARRIFLGELRLGNSPLHFTYSVKSDGNSVI
GLCLHFINSADTEKKTSVLLASWGDALLTMGRFSSNFNSVIMPRHVKKHQTAPEWVIQES
SITMEGSTLTEIHAVCYNSNPTVRRLNSPSVRDPSEYYAVLGHMSIKSSTDNIVFPRASE
WHLESQNVNWTSDSQGNKTLSLKVLWTLNHGLSSVFSKYNIYVETEPNESAQASKYVGVA
LVNAYYFSELLVPDGVSSLKFIIQACGINGDCQELVESPFLRLHVEGV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgctgttaaactttgttgaaaaatatatagaccgccaaactctgattacaattcacaac
atctacacttcaatcatttcactaattttccccaaaatgaccaccactgattcccaaccc
atattcaatcccaatattccatcgccaccaatttcttacccaatcaaaacacttgaagac
ttaagactccgtacatatttcgattcgtttcacttcgagttcaacaaatcgtcggttgcg
ttacgacgacagcgtgatgacgacgtgatgctgccgaataggcgtaggctgatggtgtgt
catgatatggaaggaggttatactaatgatgataaatggattcaaggtggaaataatgcg
gatgcttattccatatggcattggtatttgattgatgtttttatctacttttcacataat
ttggtcactttgccgccaccttcttgggttaataccgctcatctccatggtgtcaaggtg
ttgggaacttttatagtagagtgggctgaaggaaaattgattgcagagcagttcctggaa
acaactacaattgctgagatgtatgctgagcgtttgtctgaacttgctgttgcgttgggc
tttgacgggtggctgataaatatggaggtcagtttggacatcaaaaaaattcctatctta
aagaaatttgtcagccatttaacccaggttatgcattcttcaatgcccggatctatagtt
atctggtatgacagtataacaattgagggtcagctcatatggcaagatcaattaaatgac
aaaaacaagcccttttttgatatatgtgatggcattttcatgaactattcctggaaggaa
gattatccaaggtcatctgctgctgttgccgggaatagaaagtttgatgtgtacatgggg
attgatgtttttggtagaggcacttatggtgatggacaatggacgacaaatgtggcactt
gatgtactaaagaaagatgatgtgtcagccgccatatttgctcctggatgggtttacgag
actaagcaaccccctaactttcagactgctcagaatcggtggtggagtcaagttgagaaa
tcatggggaatatcacaaacttatcctagagttcttccattctactcaaacttcgatcag
ggtcatggttaccatctatctgttgatggaagtctagtctcagatgcaccttggaacaat
atttcgaatcaaagctttcagccatgtcttgagttatctggagatgctgcaactgaaaca
attcaagcatttgttgattttaaagaagcatcgtatagtggaggaggaaatatcacattt
aaaggagtccttgaagataatgcttatgtggcaagaagaatctttctgggagaacttcgt
ctggggaattcaccactccactttacatactcggtgaaatcagacgggaattctgtgatt
ggtctttgtcttcatttcataaacagtgcagacactgaaaagaaaacctcagttcttctt
gcatcttggggagacgccttgcttactatgggacggttctcaagcaactttaacagtgtc
attatgccacgtcatgtgaaaaagcatcaaacagcaccagaatgggtcatacaagagagt
agcatcacaatggaaggatccacgttaactgaaattcacgctgtttgctacaattcaaat
cctacagtaaggaggctaaattcaccctcagttcgtgatccatcagaatattatgcagtt
cttggtcatatgtcaattaaatcttctactgataacatagttttcccacgagcctcagag
tggcatcttgaaagccaaaatgtcaactggacatctgattctcagggaaacaaaaccctt
tcccttaaagttctctggacattgaatcacggcctctcttctgtattttccaagtacaac
atttatgttgaaactgaaccaaatgaatcagcacaagcatcaaagtatgttggagtagca
ttggtgaacgcttattatttttctgagcttttggtcccagatggtgtttcaagcctcaaa
ttcatcatccaagcttgtggcatcaatggtgattgccaggaacttgtggaatctcctttc
cttcggttgcatgttgaaggtgtgtag
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