Erigeron canadensis (horseweed): 122602909
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Entry
122602909 CDS
T07610
Name
(RefSeq) SEC12-like protein 1
KO
K14003
prolactin regulatory element-binding protein
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122602909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122602909
Membrane trafficking [BR:
ecad04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
122602909
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
EIF3I
WDR55
Beta-prop_Vps41
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
122602909
NCBI-ProteinID:
XP_043631456
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Position
6:complement(38713600..38718437)
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AA seq
391 aa
AA seq
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MEGGVTAEQGTVKFAAWIRRPENAHLVALGKLKHGDLPASLQIFTFDRITNSLSSSPEAS
YEFEEGCDPVSIAVHPSGDDIVCSTTKGGCRLFQLYGQEKNIKMVTKDLKPLQEVGPQKC
LAFSTDGSRFAAGGMDGHLRIHEWPSMRVIVDESKAHKSFNDMDFSLDSEFLASTSTDGS
ARIWNANDGVPVNSLTRNSDEKIELCRFSKDGTKPFLFCTVQKGNKSITVVWDISTWNRI
GFKRLLRKPACVMSISLDGKYLAQASKDGDVCVVTVKKMEVSHWSKRLHLGSSITSLDFC
PSERVVLSTSNEWGAMVTKLNVPADWKEWQIYALLIGLFLASAILFYIFFEASDSFWNFP
LGKNQPTRPKLGSFLGDPQSDDKNIWGPVDM
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggagggcggtgtaacggcggaacaaggaacggtgaaatttgcggcgtggatccggcga
ccggaaaatgctcatttagtagcgctggggaagttgaaacacggcgatctccctgcttct
cttcaaattttcactttcgatcgtattactaactctctctcttcatctcccgaggcgagt
tatgagtttgaagaaggatgtgatccagtaagtatagccgttcatccaagcggtgatgat
atcgtttgttctactaccaaaggcggttgcagattgtttcagttgtatggccaagagaag
aatattaagatggtaaccaaagacctaaagcctctccaggaggtgggaccacaaaagtgc
cttgcctttagcacagatggatccagatttgctgccggagggatggatgggcatctcaga
atacatgagtggccaagcatgcgagtcatagtagatgaatcaaaagctcacaagtcattc
aatgatatggacttcagcctagattcggagttcctagcttcaacatccacggatggctct
gctaggatttggaatgctaatgatggtgtcccagtaaactctttgactcgaaattcagat
gagaaaatcgagctatgtcgattttctaaggatgggacaaaaccgtttttgttttgcact
gtccaaaagggcaataaatcaatcacagttgtatgggacatcagtacgtggaacagaatt
gggtttaaaagacttcttagaaagcctgcttgcgtgatgtcaatcagcctggatgggaag
tatttagctcaggcaagtaaagatggtgatgtgtgtgtagtaacagtgaagaagatggag
gtttctcattggagtaagaggcttcacttgggctcttccatcacctccctggatttctgt
cccagtgaaagggttgttctttccacatctaatgaatggggtgctatggtaaccaagtta
aatgttcctgcagattggaaagaatggcagatatatgctctgcttattggactattttta
gcatctgcaatcttgttctacatattctttgaggcttctgattcgttttggaacttcccg
cttggaaaaaaccaacccactcgaccaaagcttggttcttttctaggagatcctcaatct
gatgacaaaaacatatggggtcctgttgacatgtaa
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