Erigeron canadensis (horseweed): 122603221
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Entry
122603221 CDS
T07610
Name
(RefSeq) 25.3 kDa vesicle transport protein
KO
K08517
vesicle transport protein SEC22
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04130
SNARE interactions in vesicular transport
ecad04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122603221
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122603221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122603221
Membrane trafficking [BR:
ecad04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
122603221
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Gene cluster
GFIT
Motif
Pfam:
Longin
PHA-1
Motif
Other DBs
NCBI-GeneID:
122603221
NCBI-ProteinID:
XP_043631805
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Position
6:complement(43659020..43661589)
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AA seq
229 aa
AA seq
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MVKLTIVGRISDGLPISQQGPDHINQVVDDDIITNFRKHAELLLHEISIAALPPSSATIF
IHPHCFYYMVRNGICFITLCEESYPRKLAFHYLQDLQKEFGDKIHDHHPELVNQITKPYS
FVKFDNIIRNVRRQYVDTRTQANLSKLLSCNHTQEFEDVHTEQMSLVIERRRRSDIMMRM
MTAHKSTSPVWGSKTLEVIAVKWTPITIIFVVVFVLLWSILLRARDRMY
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctaacaatagttggaaggataagtgatggattgcccatctcacagcaagga
cccgatcacattaatcaagtagtcgatgatgacatcatcacaaatttcaggaaacatgca
gagttgttgctccatgaaatctccattgcggccttgccaccttcatctgccaccattttc
attcatccccattgcttctactacatggtgaggaatggtatatgtttcattacattatgt
gaagaatcatatccaagaaagcttgcattccactacctccaagatttgcaaaaggaattt
ggtgacaagattcatgatcatcatccggaacttgtaaaccaaataactaaaccctacagc
tttgtcaaatttgataacattattcgcaatgtcagaagacaatatgtcgatacaaggact
caggcgaatttgtcgaagctgctaagttgtaaccacacacaagagttcgaagatgttcat
actgaacaaatgtcgttggttattgaaaggaggagaagatcagatatcatgatgagaatg
atgacagcccataaaagtacttctccggtgtggggatccaagactctagaggttattgct
gtgaaatggacaccaatcacaatcatcttcgtggttgtgttcgttcttttgtggagcatc
ttattaagagcaagagatcgaatgtactaa
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