Erigeron canadensis (horseweed): 122603236
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Entry
122603236 CDS
T07610
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122603236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122603236
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122603236
03012 Translation factors [BR:
ecad03012
]
122603236
04131 Membrane trafficking [BR:
ecad04131
]
122603236
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122603236
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122603236
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122603236
Translation factors [BR:
ecad03012
]
Eukaryotic type
Elongation factors
122603236
Membrane trafficking [BR:
ecad04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
122603236
Exosome [BR:
ecad04147
]
Exosomal proteins
Proteins found in most exosomes
122603236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
AAA_22
SRPRB
Motif
Other DBs
NCBI-GeneID:
122603236
NCBI-ProteinID:
XP_043631829
LinkDB
All DBs
Position
6:35702058..35704978
Genome browser
AA seq
449 aa
AA seq
DB search
MGKEKIHVSIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLLEALDAINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGIIKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDIKRGYVASNSKDDPAKGAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMLPTKPMVVETFAEYPPLGRFAVRDMRQT
VAVGVIKSVDKKDPTGAKVTKAAAKKGAK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaaaaaatccatgtgagcattgttgttattggacatgtcgactctggcaag
tccaccactacaggtcacttgatctataagcttggaggtattgacaagcgtgtcattgaa
agatttgagaaggaagctgctgaaatgaacaaacgttcattcaagtacgcatgggttctt
gacaaacttaaggcagagcgtgaacgtggtattaccattgatattgccttgtggaagttt
gagaccaccaagtactactgcacggtcattgatgcccctggacatcgtgatttcattaag
aacatgattactggtacttcccaggctgactgtgctgttctcatcattgactctaccact
ggtggttttgaagctggtatttccaaagatggacagacccgtgagcacgctctccttgct
tttactcttggtgtcaagcaaatgatttgctgttgtaacaagatggatgctaccacacct
aagtactctaaggcaaggtacgatgaaattgtgaaggaagtgtcttcatacctcaagaag
gttggatacaacccagacaaaattgcatttgtgcccatctctggttttgagggtgacaat
atgattgagaggtctacaaaccttgactggtacaagggtccaacccttctcgaggctctt
gatgctatcaatgagcccaagagaccatcagacaagccactccgtttaccacttcaggat
gtttacaagattggaggtattggaactgtgccagtgggacgtgtggagactggtatcatc
aagcctggtatggtggttacttttggaccaactggtttgacaactgaagttaagtctgtt
gagatgcaccatgaagctctacaagaggctcttcctggtgacaatgttggtttcaatgtt
aagaatgttgctgtcaaggatatcaagcgtgggtatgttgcatccaactccaaggatgac
cctgctaagggtgctgccagtttcacttctcaggttatcatcatgaaccacccgggtcag
attggaaatggttatgctccagtgcttgattgccacacctcacacattgctgttaagttc
tctgaaatcttgaccaagattgacagacgatcaggaaaggaaattgagaaggagcccaag
ttcttaaagaatggagatgctggtatggttaagatgcttcccaccaagcccatggttgtt
gagacattcgcagagtacccaccacttggaagatttgcagtgagagacatgcgtcagacc
gttgctgttggtgttatcaagagtgtggacaagaaggacccaaccggagccaaggtgacc
aaggcagcagccaagaagggagccaagtga
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