Erigeron canadensis (horseweed): 122603239
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Entry
122603239 CDS
T07610
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122603239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122603239
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122603239
03012 Translation factors [BR:
ecad03012
]
122603239
04131 Membrane trafficking [BR:
ecad04131
]
122603239
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122603239
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122603239
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122603239
Translation factors [BR:
ecad03012
]
Eukaryotic type
Elongation factors
122603239
Membrane trafficking [BR:
ecad04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
122603239
Exosome [BR:
ecad04147
]
Exosomal proteins
Proteins found in most exosomes
122603239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
AAA_22
SRPRB
Motif
Other DBs
NCBI-GeneID:
122603239
NCBI-ProteinID:
XP_043631830
LinkDB
All DBs
Position
6:35683830..35687439
Genome browser
AA seq
449 aa
AA seq
DB search
MGKEKIHVSIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLLEALDAINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGIIKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDIKRGYVASNSKDDPAKGAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMLPTKPMVVETFAEYPPLGRFAVRDMRQT
VAVGVIKSVDKKDPTGAKVTKAAAKKGAK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaaaaaatccatgtgagcattgttgttattggacatgtcgactctggcaag
tccaccactacaggtcacttgatctataagcttggaggtattgacaagcgtgtcattgaa
agattcgagaaggaagctgctgaaatgaacaaacgttcattcaagtacgcatgggttctt
gacaaacttaaggcagagcgtgaacgtggtattacaattgatattgccttgtggaagttt
gagaccaccaagtactactgcacagtcattgatgcccctggacatcgtgatttcattaag
aacatgattactggtacttcccaggctgactgtgctgttctcatcattgactctaccact
ggtggttttgaagctggtatttccaaagacggacagacccgtgagcacgctctccttgct
tttactcttggtgtcaagcaaatgatttgctgttgtaacaagatggatgctaccacacct
aagtactctaaggcaaggtatgatgaaatcgtgaaggaagtgtcttcatacctcaagaag
gttggatacaaccctgacaaaattgcatttgtgcccatctctggttttgagggtgacaat
atgattgagaggtctacaaaccttgactggtacaagggtccaacccttcttgaggctctt
gatgctatcaatgagcccaagagaccatcggacaagccactccgattaccacttcaggat
gtttacaagattggaggtattggaactgtgccagtgggacgtgtggagactggtatcatc
aagcctggtatggtggttacttttggaccaactggtttgacaactgaagttaagtctgtt
gagatgcaccatgaagctctacaagaggctcttcctggtgacaatgttggtttcaatgtt
aagaatgttgctgtcaaggatatcaagcgtgggtatgttgcatccaactccaaggatgac
cctgctaagggtgctgctagtttcacttcccaggttatcatcatgaaccaccctggtcag
attggaaatggttatgctccagtgcttgattgccacacctcacatattgctgttaagttc
tctgaaatcttgaccaagattgacagacgatcaggaaaggaaattgagaaggagcccaag
ttcttgaaaaatggtgatgctggtatggttaagatgcttcccaccaagcccatggtggtt
gagacttttgcagaatacccaccacttggaagatttgctgtgagagacatgcgtcagaca
gttgctgttggtgttattaagagcgttgacaagaaggacccaactggagccaaggtgacc
aaggcagcagccaagaagggagccaagtga
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