Erigeron canadensis (horseweed): 122603418
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Entry
122603418 CDS
T07610
Name
(RefSeq) rab escort protein 1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ecad01006
]
122603418
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122603418
Prenyltransferases [BR:
ecad01006
]
Protein prenylation
Rab geranylgeranyltransferase
122603418
Membrane trafficking [BR:
ecad04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122603418
Endosome - Lysosome transport
Rab GTPases and associated proteins
122603418
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
122603418
NCBI-ProteinID:
XP_043632046
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All DBs
Position
6:complement(28383510..28388865)
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AA seq
550 aa
AA seq
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MAETSESYPPIEPSNFDLIVIGTGLPESIIAAAASTAGKTVLHLDPNSFYGSHYSSLTLT
ELTSFLQSQNPNNQSHSATSDTDVHVTTRSIYSDIEINTYDQIVNEHSRKFIIDVSGPRV
LFCADVAVDLLLKSSANQYVEFKNIDASFVCDENGKLVNVPDSKSAVFRDKSLKFSEKNQ
LFGFFKLVQGHLEAVKGGSNGDDERIVSSEDLESPFVAFLDKMKFPAKIKSIILYAIAMV
DYDQDAGESCKNMIKTRDGIDRLALYHSSVGRFPNALGALIYPIYGQGELAQAFCRRAAV
KGCLYVLRMPVISLILDKDGGNYRGVKLVSGQELTSHQLVMGPSFTITSSLVKSPSESLQ
EASKVFGIGDVSGKLARGICITKSSLKPDIMNCLVIYPPRSLHPDQTTSIRVLQLGSNLA
VSPSGMFVIYISVVCDDTLEGKKLLHTVVKSLFSVRASGTTDSNITDQADSTEVKPTLLW
SALYIQDLIEGSMGPVVTTPTPDGNLNYSDLLGVTSKLFQKLYPDDEFFPETNNSESVDK
HEDDNKELES
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaacttcagaatcatacccaccgatcgaaccgtcaaacttcgatctcatcgtc
atcggcaccggcttaccggaatccatcatcgccgctgccgcttccaccgccggaaaaacc
gtccttcatctcgatccaaattctttttacggctcacactattcctccctcactctcaca
gagctaacttcctttctccaatctcaaaaccctaacaaccaatcacactccgccacgtca
gacaccgacgtccacgtcaccacccgatccatctactcagatatcgagataaatacatac
gatcaaattgtaaatgaacattctagaaagtttattattgatgtatcaggacctagggtt
ttgttctgtgctgacgtggcagttgatttgttgttgaaatctagtgctaatcagtatgtt
gagtttaaaaatattgatgctagttttgtttgtgatgagaatgggaagttagttaatgtt
ccggattcgaaaagcgcggtttttagggataagagtttgaagtttagtgagaagaatcag
ttgtttggcttttttaaacttgttcaaggtcatctcgaagcggttaagggcggttcgaat
ggtgatgatgagaggattgtttcaagtgaggatttggaaagtccgtttgttgcgtttttg
gataaaatgaagttccctgccaagattaaatcgattatactctatgcgattgccatggtt
gattatgatcaagatgctggagagtcttgtaaaaatatgatcaagacaagagacgggatt
gaccgtttagctctttaccactcatcagtcggaaggtttcctaatgcacttggtgctttg
atataccccatttatggccaaggagaactagctcaagccttttgccgccgtgctgctgtc
aaagggtgtctttatgttttgcggatgcctgtaatatctctaattctggacaaggatggg
gggaactatagaggtgtcaaattggtttctggccaggaacttaccagccatcagctggta
atgggtccatcatttaccataacatcttcactggttaaatctccttcagaatctctccaa
gaagcttctaaagtctttggtattggagatgtcagtggcaagttggcccgtggaatatgc
atcacaaagagctctttaaaacctgacataatgaattgtcttgtcatatatcctcctaga
tctctgcatcctgatcagactacatcaattcgagttctccagcttgggagtaatctagct
gtttctccgtctggcatgtttgttatctacatttcagttgtatgtgatgatacacttgaa
ggcaaaaagttactccacacggtggttaaaagtcttttttcagtacgtgcctctggtaca
actgatagcaatattactgatcaagccgacagtacagaagtgaagcccactttgctttgg
agtgcactgtatatacaggatctgattgagggttcgatgggacctgtggttacaactcct
accccagatggaaatctgaactatagtgatcttttgggtgttacttcaaagctctttcag
aagctgtaccctgatgatgaatttttcccagaaacaaacaactcagaatcagttgataag
cacgaggatgataataaagagttagaatcctaa
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