Erigeron canadensis (horseweed): 122603463
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Entry
122603463 CDS
T07610
Name
(RefSeq) vacuolar protein sorting-associated protein 9A-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122603463
Membrane trafficking [BR:
ecad04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122603463
Protein recycling
Other Rab GTPase associated proteins
122603463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
122603463
NCBI-ProteinID:
XP_043632109
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All DBs
Position
6:complement(41076579..41079274)
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AA seq
454 aa
AA seq
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MENAEPFSASTAPLTWHDFLERMRHPSASEFVKAIKSFIVSFLNNAPDPERDSASVQEFL
SNMEAAFRAHPLWAGRSEEELDSAGEGLEKYIMTKLFTRVFASNPDDVKVDDELYEKLAL
VQQFIRPEHLDIQPTYQNESSWLLAQKELQKINIYKAPRDKLVCILSCCKVISNLLFNAS
VDANESPPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRESRLVGEAAYFFTNMLSAE
AFVTNINGESLSMDEAEFQKNMESAQALIYGLSGDYDGGQNQSLSEPKNIKSLESSVAVQ
STIEETITKDQQQGSVSPVNKVPSVSDLENKGASILIKEDTAAKEFQNFPYLYSQAGDLT
VGDVENLLNSYKQLVLKYVSLAKGLGVLAPTVQLSTTESDAVTFSEVEDKVAIEHRQVDD
GRVEGGSDGGKDVYSGNSEPTLSEEVVSHTEGKD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgctgaaccatttagtgcgtcaaccgcaccattgacatggcacgactttttg
gagcgcatgaggcatccatctgcatcagaatttgttaaagccatcaaaagtttcattgta
tccttcttgaataatgcaccagatcctgaaagagacagtgcatctgttcaagagttccta
agcaatatggaagccgctttcagggcacatcctctttgggcgggtcgatctgaagaggag
ttagatagtgcaggtgaagggctcgagaagtacataatgacaaaattgtttacacgtgtc
tttgcttcaaacccagatgatgtgaaagtagatgacgaactctatgagaagttagctttg
gttcagcaattcattcgacccgagcacttagatattcaaccaacgtatcaaaatgaatcc
tcatggttacttgctcaaaaggagctgcagaaaatcaatatctataaggcaccacgagac
aaacttgtgtgcatcctcagttgctgtaaggtcatcagtaacttgctgttcaatgcttcc
gttgatgcaaatgaaagtcctcctggggctgatgagtttcttccggttcttatatatgtt
accataaaagcaaaccctcctcaattgcattcaaatttgttgtacattcaacgctacagg
cgagaatctagactagttggagaagcagcttatttctttacaaacatgctatccgcagag
gcatttgttacaaacataaatggtgaatcactgtcaatggatgaagcagagtttcagaag
aatatggagtctgctcaagctcttatctatggcttatcgggagattatgatggtggtcaa
aatcaaagcctatcagaacctaaaaacatcaagagtctagaaagtagtgttgcagttcaa
tctacgattgaagagacaatcacgaaagaccaacaacagggatcagtatctccagtgaac
aaagtcccatcagtttccgatttggagaataaaggggcaagtatcctcattaaagaagac
actgcagctaaagaatttcaaaacttcccatatctgtactcacaagcaggtgatttgacg
gtgggtgatgtagaaaatttgctaaatagttacaagcaacttgtgttgaagtatgttagc
cttgcaaaagggttgggtgttttagccccaacggtccaactgtctacaacggaaagtgat
gcagtaacctttagtgaagtggaagataaggtagccatagagcaccgccaggtagatgat
ggtagagtagagggaggttccgatggaggtaaggatgtttatagtgggaattcagaacca
acattatccgaggaagttgtatctcacacagagggaaaagattaa
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