Erigeron canadensis (horseweed): 122603473
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Entry
122603473 CDS
T07610
Name
(RefSeq) transcription factor IIIB 60 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122603473
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
122603473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_C
TFIIB_C_1
BRF2-like_C_cyclin_rpt
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
122603473
NCBI-ProteinID:
XP_043632122
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All DBs
Position
1:complement(45201078..45209967)
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AA seq
615 aa
AA seq
DB search
MTWCPHCVKNSQTHRDHTTGSVCCVDCGKVISQDLYTEDATFVKDAGGGARLAGNLVKMG
SACSESHIRTLNKGNTVIYELTDKYGITNVDHATKYYQIAVERGFTRGRRTSQVAAACLY
VACRELEKPFLLIEFSSELGVSVYELGTVYLQLCKLLSLQDHPFVQKPVDPSLFMHRYTS
GLMKNDDSNNKKVLNTALHLAVSMKRDWIQTGRKPSGICAAAIYVSSVLHGYNFSRADVV
KAVHICEATLTKRLIEFENTKAGSLTIEEFTNEAMKFEKDMRYCKQSAIDIKMPGATEVV
CQHKNSAVQSGFGLCRNCYLEFCGGLDGSEPPAFQRAEMERLSKESVKSMTDSTLNKEPL
PKTTANGNGSQHYSELQANAKERYEGSSLEFQCASPNSGKVDRIGDTVDAFENSKDPPAT
VDETDTLSEIDDHEVDFYLHTEDETRLKEIVWTHMNQDYIQEEAAKKAAAAAAAEAARKL
YTGTSEEIREAQALAAATAAAVASKKEKDKHRRAMEAKNAKPAQTAAEAAGQLFTKKKLS
SKINYDALKDIFDDEPSPKKSRIEDEDDGSGKEPKETNDNEYNDDETEGHEWNYDDEYQM
DGDVYDDEDAYLEEY
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgacttggtgccctcattgtgtcaaaaatagccaaacacatcgtgatcacaccaccggc
agcgtatgctgtgttgattgcggaaaagtcatatctcaagatttatatacagaggatgct
acttttgttaaagatgccggcggaggggctcgtctggcaggcaaccttgttaaaatggga
agtgcttgttccgagtcacatataagaaccctaaacaaagggaacacggtaatctatgaa
ctcacagacaaatatgggatcaccaacgtcgatcacgctactaaatattaccagatagct
gttgagcgtggctttacaaggggacgtagaacatctcaagttgcagctgcctgtctttat
gttgcttgccgggaactagaaaaaccttttctgcttattgaattttccagtgaattaggt
gttagtgtctacgagttaggcactgtgtatttacaactatgcaagctgctaagcctccag
gatcatccctttgttcaaaaaccagttgatcctagcctttttatgcatagatatacaagt
ggactaatgaaaaatgatgatagtaataataagaaagttctgaacactgcattgcacctt
gcagttagcatgaaaagagactggattcagactgggaggaaacctagtggtatatgtgcc
gcggctatctatgtttcttcagtgttacatggatataatttttcaagagcagatgttgtt
aaagctgtacacatatgtgaagcaacattgacaaagcgattgattgaatttgaaaataca
aaagctgggagtttaacaattgaagaatttacaaatgaagctatgaaattcgagaaggat
atgcggtactgcaaacaatctgccattgacataaagatgcctggagcaacggaagtggtc
tgccagcataaaaacagtgctgttcaatctggttttggcctttgtaggaactgttatctg
gagttctgtgggggacttgatggttctgaacctccagcatttcaacgtgctgaaatggaa
agattatccaaggaatcagtgaaaagtatgacggactcaactcttaacaaagagcccctc
ccaaaaactactgcgaatggaaatggtagtcaacattacagtgaactccaagcaaatgcc
aaagaaaggtatgaaggctcctcactagagttccaatgtgcttctcccaactctggaaaa
gtcgacagaattggtgatactgtagatgcttttgaaaactcgaaggacccccctgctact
gttgatgaaacagataccctctctgaaattgatgatcatgaggttgatttttacctgcac
actgaggatgaaactcggcttaaggagatcgtatggacacatatgaaccaagattacata
caggaagaagctgctaagaaagctgcggcagctgctgcggcagaagctgcgcgtaagctc
tataccgggacctcggaggaaatacgtgaagcacaggcacttgctgcagcaacagctgca
gctgttgcaagcaaaaaagagaaagataaacataggcgagctatggaggccaagaatgct
aagcctgcccaaactgctgcagaagctgctggtcaattgttcacaaaaaagaaattaagt
tccaaaattaactatgatgcgctaaaggatatctttgatgacgagccaagtccaaaaaag
agccgtattgaagatgaggatgacggatctgggaaggaacctaaagaaacaaacgacaac
gaatataatgatgatgaaacagaaggtcacgaatggaactatgatgatgaataccaaatg
gatggcgatgtttatgatgatgaagatgcgtatcttgaagaatattga
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