Erigeron canadensis (horseweed): 122603482
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Entry
122603482 CDS
T07610
Name
(RefSeq) transcription factor IIIB 60 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122603482
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
122603482
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Lar_restr_allev
BRF2-like_C_cyclin_rpt
TFIIB_C_1
Motif
Other DBs
NCBI-GeneID:
122603482
NCBI-ProteinID:
XP_043632133
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All DBs
Position
1:complement(45216753..45227687)
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AA seq
540 aa
AA seq
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MTWCPHCVKNSQTHRDHTTGSVCCVDCGKVISQDLYTEDATFVKDAGGGARLAGNLVKMG
SACSESHIRTLNKGNTVISELTNKYGITNVDHATKYYQIAVERGFTRGRRTPLVAAACLY
VACRELEKPFLLIEFSSELGVSVYELGTVYFQLCMLLSLQDHPFVQKPVDPSLFMHRYTS
GLMKNDDSNNKKVLNTALHLAVSMKRDWIQTGRKPSGICAAAIYVSSVLHGYNFSRADVM
EEFTNEAMKFEKDMRFCKQSKMPGVTEVVCQHKNSAVQSGFGLCRNCYLEFCGGLDGSEP
PAYQRAEMERLSKESVKSMMDSTLNTEPLPRPIANGNGSQHYSELQANAKENYKGSSPEF
QCASPNPGMLDKIGDTADIFISSKDPPATVDETDTLSEIDNNEVDCYLLNPEETRLKTKV
WEMMNENSKQARKLYTGTSQEIREAQALAKKEKDKRRRAMEAKNAKPAQTAAEAAGQLFT
KKKLSSKINYDALKDIFDDEPSPKKSRIEDEDEESGKEPRETNDMEHNDDETEGHEWNND
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgacttggtgccctcattgtgtcaaaaatagccaaacacatcgtgatcacaccaccggc
agcgtatgttgtgttgattgcggaaaagttatatcgcaagatttatatacagaggatgct
acttttgttaaagatgctggcggaggggctcgtctggcaggcaaccttgttaaaatggga
agtgcttgttccgagtcacatataagaaccttaaataaagggaacacggtaatctctgaa
ctcacaaacaaatatgggatcaccaacgttgatcatgctactaaatattaccagatagct
gttgagcgtggctttacaagggggcgtagaacacctctagttgcagctgcctgtctatat
gttgcttgccgggaactagaaaaaccttttctgcttattgaattttccagtgaattgggt
gttagtgtctatgagttaggcactgtgtattttcaactatgcatgttgttaagcctccag
gatcatccctttgttcaaaaaccagttgatcctagcctttttatgcatcgatatacaagt
ggactaatgaaaaatgacgacagtaataataagaaagttttgaacactgcattgcacctt
gcagttagcatgaaaagagactggattcagactgggaggaaacctagtggtatatgtgca
gcggctatctatgtttcttcggtgttacacggatataatttttcaagagcagacgttatg
gaagaattcacaaatgaagctatgaaattcgagaaggatatgcggttctgcaaacaatct
aagatgcctggagtaacagaagtggtctgccagcacaaaaacagtgctgttcaatctggt
tttggcctttgtaggaattgttatttggagttctgtgggggacttgatggttctgaacct
ccagcatatcaacgtgctgaaatggaaagattatctaaggaatcagtgaaaagtatgatg
gactctactcttaacacagagcccctcccaagacctattgcaaatggaaatggaagtcag
cattacagtgaactccaagcaaatgccaaagaaaattataaaggctcctcaccagagttc
caatgtgcttctcccaaccctggaatgctcgacaaaattggtgatactgcagatattttt
ataagctcgaaggacccccctgctactgttgatgaaacagataccctctctgaaattgat
aataacgaggttgattgttacctgctcaatccggaagaaactcggcttaagacgaaagta
tgggaaatgatgaacgaaaactccaagcaggcacgtaagctctataccgggacctcacag
gagatacgtgaagcacaggcacttgctaaaaaagagaaagataaacgtaggcgagctatg
gaggccaagaatgctaagcctgctcaaactgctgcagaagctgctggtcaattgttcaca
aaaaagaaattaagttccaaaattaactatgatgcgctaaaagatatcttcgatgacgag
ccaagtccaaaaaagagccgtattgaagatgaggatgaagaatctgggaaggaacctaga
gaaacaaacgatatggaacataatgatgatgaaacagaaggtcacgaatggaacaatgat
tag
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