KEGG   Erigeron canadensis (horseweed): 122603511
Entry
122603511         CDS       T07610                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122603511
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ecad03041]
    122603511
Spliceosome [BR:ecad03041]
 Complex A
  U2 snRNP components
   U2 related factors
    122603511
 Complex B
    122603511
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 122603511
NCBI-ProteinID: XP_043632169
LinkDB
Position
6:complement(7133162..7138871)
AA seq 327 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDSITP
GVDPQGHPLDPHKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE
HAATALQNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL
RRELFGKSRRRRSRSRSHSPQRHRGYDERGRGSGRRSGDYADHDYRHHDRSGRRPRSRSP
ARRGGRSRSPGGKRNRSPVREGSAERRAKIEQWNREREKADSQPKNTTDNNINDGGLNDG
GVAPNGDQYYDPLQQQHQQHDDGGYDN
NT seq 984 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcatcaatatttggtacggaaaaagacagagtgaactgtccgttt
tatttcaagataggagcgtgtcgacatggcgacagatgctcaaggctacacacaaaaccg
tccatttcaccaacgcttttgttatcaaatatgtatcagcgacctgattccatcactcct
ggtgttgatcctcagggccatccccttgatcctcataaaatccaagatcactttgaggat
ttttatgaagatttgtttgaagagctgagcaagtacggggagattgaaagcctaaacata
tgtgataatttggctgatcacatggttggcaatgtgtatgtccagtttagggaagaggag
catgctgcaaccgctcttcagaatctgactggaaggttttatgcaggtcgccctatcatc
gtggacttctctccagtgacagatttccgtgaagctacatgtcggcagtatgaagaaaac
gtatgcaatcgtggtggttactgcaacttcatgcatttaaaaaagatcagcagagagttg
aggagagagttattcgggaaaagccgaaggaggagaagtcgaagcaggagccacagtcct
cagaggcaccgtggttatgatgagcgtggccgaggctcaggaagaagaagcggtgactat
gcagatcatgattaccgtcatcatgataggagtggcaggaggcccagaagcaggagcccc
gcacgaagaggtggacgtagcagaagtcctggtggaaagagaaaccggagcccagttagg
gaaggcagtgctgaaaggagggcaaagattgagcaatggaacagagaaagggagaaagca
gattcacaaccaaaaaacaccactgataacaatatcaatgatggcggccttaatgatgga
ggtgttgcaccgaatggagaccagtattatgatcctcttcagcagcagcatcagcaacat
gatgatggaggttatgataactag

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