KEGG   Erigeron canadensis (horseweed): 122603542
Entry
122603542         CDS       T07610                                 
Name
(RefSeq) la-related protein 1A
  KO
K18757  la-related protein 1
Organism
ecad  Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecad03019]
    122603542
Messenger RNA biogenesis [BR:ecad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122603542
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 122603542
NCBI-ProteinID: XP_043632202
LinkDB
Position
6:22185231..22208187
AA seq 775 aa
MIMMGDNDNDNHKDPPPPPKSPWKTPTTPPPPPVEAANSGDHSDSGSWPALSSLNSPTQH
PPQTQVPAVEPQKPHLRGNHNRQSTRPHKAAPSKQNPNAAPSFHGPLPFHQPPIPPPLYG
GMAPWPPHIPVHGYAYPPPAVAPFSPANGPITGPIRGNTSTFGGEFPSRRPNVQENQKPL
GPKENNDVQPNAGPRAFIRPPFFGPPAGFIGTFPGPPGSIVYLPAIPPFSVRPPHPPFAV
PPQLGPGIPVLPSQTQSMRASVRTQIEYYFSDQNLQGDQYLRSLMDDNGWVPISTIAEFK
RVKRMCTDIPFIVDALQNSSMLEVQGDNVRRREEWSKWIPGNKSTLTEVHSIKQSKENVK
IIDSLKEDTSGEDHFSSKNKSKFSRQNMDKLCDDFGSTFMFDEELELEQKKDANSFKTRV
DDEDDEMVVNDQAVERLVIVTQNNKNGEGNKGSVVDAKSSPNELATAINDGLYYYEQELK
SKRNKGRRNNSTNEMKDGTSRSPRVASSIANHVAGSPNSRRKHNKGLSKQQPAKNQRWFA
SNLKNNGNDLIVSESPPSSSVGFFFGSTPPDSHGLRSSKLGASPHGCFTSSSPPVGSMPK
PFPPFQHPSHQLLEENGFRQQKYVKYHKRCLNERKKCGVGCSEEMNTLYRFWSYFLRDLF
VPSMYNEFKKIALEDSAAGYNYGMECLFRFYSYGLEKEFREDVYGDFEQLTLDFYHKGNL
YGLEKYWAFHHYSRTKDHKKLPELERLLKEEYRSLNDFKVNRVKIKATAAKIDKK
NT seq 2328 nt   +upstreamnt  +downstreamnt
atgataatgatgggtgacaatgataatgataatcacaaagatcctccgccgccacccaag
tcaccatggaagacaccaacaactccgccgccgccgccggtggaagctgctaactccggt
gaccattctgattcaggttcttggccagccctttcttcattaaactctcccactcaacac
cctccacaaacccaggtgcctgctgttgagccgcaaaagccacacctgcgtggaaaccat
aacaggcaatcaacacgtccacataaagcagcacccagtaaacaaaacccaaatgctgca
ccatcttttcatggaccactacccttccatcaaccacccattccaccacccctttatggc
ggcatggcaccttggccccctcatattcctgttcatggatatgcttaccccccgcctgct
gttgctccattttctcctgcaaatggccctattacaggtccaatacgaggcaatactagt
acttttggtggcgagtttcctagtagaagacctaatgtgcaagaaaaccagaaaccatta
ggtccaaaggagaataatgacgtgcagccgaatgctgggccaagagctttcataaggcca
cccttttttggtccacctgctggatttattggtacctttcctggtcctcctggttctatt
gtgtatcttcctgctatacctccattttctgttaggcccccccatccaccttttgctgtt
ccacctcagttgggcccggggattcccgttttaccttcacagacgcaatccatgagggct
agtgttagaactcaaattgaatactatttcagtgatcagaatttgcaaggtgatcagtac
ttgcgttctttaatggatgacaatggatgggttccaatatctactattgccgaatttaaa
agggttaaaagaatgtgtacggacataccgtttatagtggatgccttgcagaactctagt
atgcttgaagtgcagggtgacaacgtgagaaggcgtgaggagtggtcaaaatggattcca
gggaataaatctactttaacagaagtacattctataaaacaatccaaggagaatgttaag
atcattgattctttgaaggaagatacttctggtgaagatcatttcagctcaaaaaataaa
tcaaaattctcgagacaaaatatggataaactttgtgacgattttggaagtacattcatg
tttgatgaggagcttgagcttgaacaaaagaaggatgctaattcttttaaaacaagggtg
gatgatgaagatgatgagatggttgtaaatgatcaagcagttgagagacttgtaattgta
acccagaataacaagaatggtgaaggaaataaaggttctgtagtggatgcaaaatcatct
ccgaacgagctcgctactgccataaacgatggcctatattactatgaacaggaactaaaa
tcaaagcgaaataaaggcagaagaaacaattcaacaaatgagatgaaggatgggacttcc
agatctcctagagttgcttcttctatagcaaatcacgttgccggcagtcctaattctaga
aggaaacataataaaggcctttccaagcaacaaccagcgaagaaccaacggtggtttgca
agcaacctcaagaataacggaaatgatcttatcgtgtcagaaagtccaccaagtagttcg
gtcgggtttttctttggttcaactcctcctgatagtcatggattaaggtcttcaaagctt
ggtgcttctccccatggctgctttacaagcagtagtccaccagtaggctccatgccaaag
ccatttccacctttccagcatcctagtcatcagcttctagaagagaatggtttcaggcag
caaaagtatgtaaagtatcacaagagatgcctaaatgaacggaagaaatgtggtgttgga
tgtagtgaggaaatgaataccctgtacagattctggtcatattttcttagggacttgttt
gtcccttcaatgtataatgaatttaagaaaatcgcactggaagattcagctgctggatac
aattatggaatggaatgccttttcagattttatagctatggtttggagaaggaattcaga
gaagatgtttacggggattttgagcagcttactcttgatttctaccataagggaaatctc
tatggccttgaaaaatattgggcattccatcactattctcggacaaaggatcacaaaaag
ctcccagaactggaaaggctactcaaagaagagtacagaagcttgaacgattttaaggtc
aaccgtgtgaaaataaaagctactgcagccaaaattgataaaaagtaa

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