Erigeron canadensis (horseweed): 122603733
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Entry
122603733 CDS
T07610
Name
(RefSeq) nuclear pore complex protein NUP160-like
KO
K14303
nuclear pore complex protein Nup160
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122603733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122603733
03036 Chromosome and associated proteins [BR:
ecad03036
]
122603733
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122603733
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122603733
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
TPR_Nup160_C
HEAT_Nup120
SusG_C
Motif
Other DBs
NCBI-GeneID:
122603733
NCBI-ProteinID:
XP_043632456
LinkDB
All DBs
Position
6:2240080..2259810
Genome browser
AA seq
1496 aa
AA seq
DB search
MSGVHHHAGVEVPIIGSDSTKWFNLSLPKPPSPTPQLHFAPPLSTDASSCCIVGDPPNYF
IWRINKTCPNVLEIVEFCTFSEFPRAGLRIDFATPLSPFAFLCKNEFSSASGKPYMLYAL
SVSGVAYLIRLTDINNYGSCSVFPPDEVFELNIQSYCDYGGITAIAATAGCLVIGGRDGS
VACFRLGILDSGAPGFLHELRDDSSFGRLWSLMSRKTVAPVMDMVCLEIQGRKALLVLHL
EGVLQVWDLLSCSRLLNYNMNVSTLEGATFMRLWAGESTNDTSILPLAVLHKPNSGGGEM
ISLYCLQFNLGGRTSFTIEPSTSNISMPEGVLIDVKLSSNKIWILEEDVLVVHNLSNSSE
SRKSEEVYILQDTVVADQLFQNSEPDADDLLLLAYALYPSAKEKIVSHVSSIFSRLLFLP
DIYHSSVIRATLHDHNKHFTDSEFNSLTADGLEKEIISVIEHEGASRSLVSLLYCWRNFC
SRYYYNWCQKNAPCGLLLDSATGAIGLVRKSSVSLLRHLEDIELLAYGSLDRLGEVARSR
INVSGDVERGVLSEVLQCTASLSQHLGKGAPALFHESLFSEPSVSAEDVVGRLLKVLETR
YSSSIAALHVSELGVDTAWEKGVVDHKILRKFSTDILLSLNGLYRKAGTWDKVLDVILKY
LNFLVPRKNENKSTSDSVFDVRTCITIQVTAQVANLMFNSAVDILLLLSYMVKLGGQINM
LPDDVSRVHLELYPLIQEIITEWHLIHFFGTTHCESPTLEDFSSRLSSLQLDSSANRRSW
IDKFGKCDFTLAYILLLDHQSSFEDQGVDLKHLPNPGFFIAPVQNFISWIVWGRSEDGSS
SFSTRSSMLALILLKHGQFDAVEHLLTLVNQNLIKEKASASIQSVNDEWCTLLHLLGCCY
LAQAQRQGPHGSMKKKHNEAISCFFRAASLHGASKLLQSLPYESGLSHLGFTYHVSPAAW
KLHYYQWAMQIFDQYNMSAGACQFALAALEQVDEVFSLKDTFSGADLLDESPITAKGRLW
ANVFKFTLDLNCYHDAYCAIISNPDEESKYICLRRFIIVLYERGALKILCDGQLPFIGLA
EKVEQELAWKAERSDVSVKPNPYKLLYSFFMHQHNWRKAASYMYLHSSQLKSEAALKDNQ
VRSLALQERLNCLSATINALHLVHPTCAWINNPLVQEKSILKELYPSKKARITIPEEEAN
DRLSSQKLDSCLDIEKLENEFVLTSAEYLLSLANVKWTFTGIEKPHPNLVELLVQSNLYD
MVFTVILKFFKGSALKRELERVFIAMTLKCCPIRESSKKNSLLLTSSKDEGAHESVNIVA
AAHHSKGNDQWDALEQYMEKYQSFHPRLPVIVAETLLCADRLIELPLWLVQMFKSTLKGC
WGMAGSEASPASLFQLYSDYGRYAEATNLLLQYIESVALLRPADVIRRKKTFAVWFPHTA
IESLLCKLGELIGAGHMVDQCEKLRNLLQMALYKHFQQLNVDSDDVISSAISSRYT
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagtgcatcaccacgccggcgtcgaggttccgataatcggcagcgattcaact
aaatggttcaatctatctctgcccaaaccaccatcaccaacaccacagctacactttgct
cctcctcttagtacagacgcttcttcttgctgcattgttggagatccccctaattatttc
atatggagaataaacaagacttgtccaaatgtcctcgagatagttgaattctgcaccttt
tcagaattcccaagggctggattgcggattgattttgctactcccttatctccatttgct
ttcctatgcaaaaatgaattttctagtgcttctgggaaaccgtacatgctttacgcattg
agtgtttctggagttgcatatcttattagactgactgatatcaataactatggatcatgt
tctgttttcccacccgatgaggtttttgagctgaatattcagagttattgtgattatgga
ggcattaccgctatagcagctaccgcagggtgtcttgtgataggtggaagggacggatct
gttgcttgtttccgacttggcatcctggattctggtgctccaggctttctacatgaacta
cgagatgattcaagttttggccgcttatggagtttgatgtccaggaagaccgtagctccc
gtgatggatatggtatgtttagagattcaagggagaaaagctcttctggtgctacatttg
gaaggcgtattacaagtgtgggaccttttgagctgtagccgacttctgaattataacatg
aacgtttcaacattggaaggagctacattcatgaggttatgggcaggagaatctaccaat
gatacaagtatactacctttggcggtcctgcataagcctaattcgggtggtggggagatg
atctcgttatactgtttgcaatttaatctgggagggaggactagttttactattgagcct
tcaacatctaacatatccatgccagagggtgtacttattgatgtcaagctttcctcaaat
aaaatctggattcttgaagaagacgtattggtagtgcacaacttgtcaaattcaagtgag
agcaggaagtccgaggaagtctacattttacaggatactgttgttgctgaccaactattt
cagaactccgagcctgatgcagacgatcttcttttgcttgcttatgcactatatccatct
gctaaggagaaaattgtctctcatgtatcgtccatcttctcacgtctgctatttcttccc
gacatttaccatagttctgttatccgagcaacacttcatgatcataacaagcacttcact
gattccgagtttaattccttaactgctgatggtttggaaaaagagatcatttctgtcatt
gaacatgagggcgcctccaggagtttggtttcccttctttattgctggagaaacttctgc
tcacgctactattacaattggtgtcaaaagaatgcaccctgtgggctacttcttgattca
gctactggtgctattggtttagttagaaaatcttctgtttctctactgcggcatttggag
gatatagagcttcttgcctacgggtcgcttgatagactcggagaagttgcaaggtctagg
atcaacgtatcaggtgatgttgaacgcggagtactctctgaggtgcttcaatgcactgct
agtttaagtcaacatctggggaaaggtgcccctgctctatttcatgaatctcttttcagt
gaaccatctgtatctgctgaagatgttgtgggacgtttattgaaggttctagaaacccga
tattcttcttctatagctgctcttcatgtatcagagttaggtgtcgatacagcctgggag
aagggagtcgttgaccacaaaattctcagaaaattctccacagatatattgttatcactt
aatgggttgtaccgaaaagctggaacatgggacaaagttctcgatgttatattaaaatac
ttgaactttttagttcctcgaaagaatgaaaacaaatctacttctgattcggtttttgat
gttaggacatgcataacaattcaagtgactgcacaggttgccaacctgatgtttaattct
gcagtggacatattattgctgctcagctatatggtgaagttaggtggccagattaatatg
ttaccagatgatgtttccagggttcaccttgagttatacccactgattcaagaaatcatt
accgagtggcatttaatacattttttcgggacaacacattgtgaatcacctaccttggaa
gatttcagttctcgactttcttcattacaattagatagcagcgctaaccgaagatcatgg
attgataagtttgggaaatgtgactttactttggcttatattctgttacttgatcatcaa
agctcatttgaagaccagggtgttgatctaaaacatcttccaaatcctggcttcttcatt
gctcctgtacagaacttcataagttggatagtctggggcaggagtgaagatgggtcatct
tctttctccactcgctcaagtatgcttgctttgatcttgcttaagcatggtcagtttgat
gctgttgagcatctccttactctggtgaaccaaaatctaatcaaggagaaagcatctgca
agtattcagagtgtgaacgatgaatggtgcacactccttcaccttcttggttgttgttat
cttgcacaagcacagcgtcaaggaccgcacggttcaatgaagaagaaacataatgaagct
atttcctgcttttttagagctgcatctttgcatggggcatcaaagttgttgcagagtttg
ccatatgaatctggattgtcgcaccttggttttacttatcatgtgtctcctgctgcttgg
aagcttcattattatcaatgggcaatgcagatttttgatcaatataatatgagtgcaggt
gcctgccaatttgcacttgctgctcttgaacaagttgatgaagtattcagtcttaaagac
actttttctggggcagatttacttgatgaatcaccaattaccgccaaaggacgactttgg
gcaaatgtgtttaaatttacacttgatttgaattgttaccatgatgcatattgtgcaatt
atctcaaacccagatgaagaaagcaaatacatttgcctgagacgttttattatcgttctt
tatgagcgtggtgcccttaagattctttgtgatggccaattaccttttattggtttagct
gagaaggtggagcaggagcttgcttggaaggcagagcgttcagatgtttccgtgaaacca
aacccttataaactcttatattcattctttatgcatcaacataattggcgcaaggctgca
agttatatgtatcttcattcatcacaactgaaaagcgaagcagctttgaaagataaccag
gtccgatcactggctctgcaagaaagattaaactgcctctctgcaactataaatgcattg
catcttgttcatccaacatgtgcatggatcaacaaccccctggttcaagaaaagtccatt
cttaaagagttgtatccaagtaaaaaggctagaatcacaattccagaggaggaagctaat
gatcgtctctcaagtcagaaattggattcctgcttggatattgagaaactagaaaatgag
tttgtcttgacatcagcagaatatttgctttcgctagcaaatgttaaatggacatttact
ggaattgagaagccccacccaaacctggttgagttgctggttcagtccaatctatatgat
atggtattcactgtaattctaaaattcttcaagggttcagcattgaagagggaacttgaa
agagtttttattgccatgacgctgaagtgctgtccaatcagggaaagttctaaaaagaat
agtttgctcttaacatcatcaaaggatgagggtgcccatgagtctgttaacattgttgct
gcagctcatcactccaaggggaatgaccagtgggatgcacttgagcaatacatggaaaaa
taccaatcctttcatcctagattaccagtgattgttgcagaaacacttctctgtgctgat
cggcttattgaacttccactttggcttgtccagatgttcaagagcacactgaaaggatgt
tggggcatggctgggtctgaagcaagccctgcttcattgtttcaactatattctgattat
gggcgatatgcagaggctactaatttgctgcttcagtatattgaatctgttgcattgctg
agaccagctgatgttattcgtaggaagaagacatttgcagtctggtttccacacacagcc
attgaaagtttgttgtgtaagcttggtgagttgattggtgcgggtcatatggttgatcaa
tgtgaaaagctaagaaacttgctacaaatggccctgtacaaacatttccaacagttaaat
gtagactcagatgatgtgatatcttcagcaatctcatctagatacacttga
DBGET
integrated database retrieval system
