Erigeron canadensis (horseweed): 122603814
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Entry
122603814 CDS
T07610
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 3-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122603814
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecad01009
]
122603814
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122603814
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122603814
03041 Spliceosome [BR:
ecad03041
]
122603814
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
122603814
Protein phosphatases and associated proteins [BR:
ecad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
122603814
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122603814
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122603814
Spliceosome [BR:
ecad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122603814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
122603814
NCBI-ProteinID:
XP_043632569
LinkDB
All DBs
Position
6:complement(40805510..40809160)
Genome browser
AA seq
309 aa
AA seq
DB search
MDPIVVDKIIERLIEARSSNKSGKLVQLSEAEIKQLCVASRDIFIKQPNLLELEAPIKIC
GDIHGQYSDLLRLFEYGGFPPQSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR
GNHECASINRIYGFYDECKRRFNVKLWKVFTDCFNCLPVAALIDDKILCMHGGLSPDLTN
LDQIRNLSRPTVIPDTGLLCDLLWSDPSKDVKEWGMNDRGVSYTFGADTVSQFLTKHDLD
LVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVNENLLCSFQILKPVEKK
SKFLMSTKM
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatccgatagtcgtcgacaagataatcgaacggctaattgaagcccgatcatcgaat
aaatccggcaagcttgttcagctgagcgaggctgaaatcaaacagctttgtgttgcttct
cgtgatatcttcatcaaacaacctaatcttcttgaacttgaagcccccatcaagatttgc
ggagatattcatggacaatatagtgatcttttaaggctttttgagtatggaggctttccg
cctcaatccaattatctttttctcggggattatgttgatcgtgggaagcagagtttggaa
acgatatgtcttttgcttgcgtataaaatcaagtatccagagaattttttcctgctcaga
ggaaaccatgaatgtgcgtcgataaataggatttatgggttttatgatgagtgtaaacgg
cggttcaatgttaagctatggaaagtgtttaccgattgttttaattgtttacctgttgcg
gctcttattgatgataagatattgtgtatgcatggtgggctatcccctgatcttactaac
ttggatcagattagaaacttgtcacgccctactgttatccctgatacaggattgctgtgt
gatttgttatggtcggatcctagtaaagatgttaaagaatggggaatgaatgatcgaggg
gtttcttatacttttggtgctgatacggtttcccagtttttaacaaagcatgatctggat
cttgtttgtcgtgctcatcaggtggtagaagatggatatgagttctttgctgacagacag
cttgtaactatattctcggctccaaattactgtggtgaatttgataatgcaggtgctatg
atgagtgtcaatgagaatctgttgtgttcgtttcaaatcttgaaaccagttgagaagaaa
agtaagtttttgatgtccacaaagatgtga
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