Erigeron canadensis (horseweed): 122603892
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Entry
122603892 CDS
T07610
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00040
Pentose and glucuronate interconversions
ecad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122603892
Enzymes [BR:
ecad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122603892
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
122603892
NCBI-ProteinID:
XP_043632673
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Position
6:complement(33130672..33132402)
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AA seq
397 aa
AA seq
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MEGGQCNQVLVLCFILVAIVPWSMAHSTAISIRSPQVKKNKGQCKAYNPIDKCWRCDRNW
GKNRKRLADCAKGFGHGTYGGKMGRIYVVNDSSDRNVIDPKPGTLRHAVLQPEPLWIIFS
SKMTIRLTQELIFTSDKTIDGRGCEVHVAGGAGFMLQFVHNVIIHGLHMYDIVEGSGGMI
RSKTDHVGIRGRSDGDAISIFKSSQVWVDHCSFASSYDGLIDIVAASTNVTISNCHFVKH
DKALLFGASDKTPEDKIMKVTLAYNHFGKGLTQRLPAVRFGFVHVVNNDYTEWQSYAIGG
ADGATIISQGNRFTAANGACKEVTKREQVPESIWRKWTWRSEGDLLLNGAYFRQSGNPHW
AKTYKGYPLIPAQPAVTVPQLTKYVGASLNCKVGSPC
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggaagggggccaatgtaatcaagttcttgttttatgtttcatacttgttgcaattgtc
ccatggtccatggctcacagcacagctatcagcatcaggagtccccaagttaaaaaaaac
aaaggtcagtgcaaagcctataaccccatcgacaaatgttggaggtgcgatcgcaactgg
ggtaaaaaccgaaaaaggctagctgattgtgccaaagggtttggccatgggacctatggt
ggcaaaatgggccgaatctatgttgtgaatgactcatcagacagaaatgtaattgaccct
aaaccgggcaccctacgccatgcagtcctccagcccgaaccactctggatcatcttctcg
agcaaaatgaccatcaggctcacccaagagcttatatttacgtctgacaagaccattgac
ggtcgggggtgtgaagtccacgtggcaggtggtgctggtttcatgctccaattcgttcac
aatgtcattatccatggccttcacatgtatgacattgttgagggctcaggtggcatgatc
aggtcaaaaactgatcatgttggcatacgagggagaagcgatggggatgccatttccatc
tttaaatcctcacaggtgtgggttgatcactgctcctttgctagcagttatgacgggctt
attgatatcgttgcagcttccaccaatgtcaccatttcaaattgccacttcgtcaagcac
gacaaggctttgctgtttggtgcaagtgacaaaaccccagaggacaagataatgaaggtg
acattggcttacaaccattttggaaaaggattgacacaacggctaccagcagtgagattc
gggtttgtacacgtggttaacaacgactacacagaatggcaatcatatgccattggaggt
gctgacggtgcaactatcataagccaaggaaaccggtttacggcagcaaatggtgcatgt
aaagaggtgacgaaaagagagcaggttccagaatccatatggcgtaaatggacatggaga
agtgaaggtgatttgttactgaacggagcttatttccgacaatcaggtaacccacattgg
gcaaaaacatacaagggttacccattgataccggcgcaaccggctgtgaccgtaccacaa
cttaccaaatacgttggtgcctcattgaattgtaaggtgggatccccttgttga
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