Erigeron canadensis (horseweed): 122603991
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Entry
122603991 CDS
T07610
Name
(RefSeq) protein argonaute 4A-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122603991
03036 Chromosome and associated proteins [BR:
ecad03036
]
122603991
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122603991
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122603991
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122603991
microRNA pathway
RISC loading complex
122603991
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
122603991
NCBI-ProteinID:
XP_043632802
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Position
6:complement(23815681..23820382)
Genome browser
AA seq
859 aa
AA seq
DB search
MARRGFGTNGQRISLLTNHFNVKLSSNSDHFYQYNVDFFYEDGSPVEAKGVGRKVLDMVQ
NMYNSEIGGKGFAYDGEKTLFTVGPFPGTSLEFRVLLENRSSNRTVRGGSPNGEETKRSR
RQSQSKSYTVKIRYATKIPIQVIFNALQGKDSEQFSEAVRVLDVLLRQHAAKQGCLLVRQ
CFFHNDPRNFVSLGGGVVGCRGFHSSFRAAQAGLTLNMDVSTTMIVRPGKVVDFLLENQN
VRTLREVDWIKAKRTLRSLRIKSFPTNREYKIIGLSERICGEQKFMLNQKTANGTANSIE
ITVYEYFAKYHHIEVKDSYDYPCLDVGKPKRPIYLPLELCELISLQRYTKALSSLQRASL
VEKSRQKPQERMKALTDALGKSNYHADPLINSTGITISTTITEVEGRVLEPPKLKSGRGG
DLFPHGGRWNFKNKVINSSFMVGSNARCNIAALSRDLVRCCRAKGMDLDDPYEIIEESPQ
FRHASAPDRVGKMFEAIRKALPGSPLFLLCILPERKNSDIYGPWKRKCLVDFGIVTQCMA
PTARINDQYLTNLLLKINAKMGGINSMLSLEHLRSIPLVSETPTIIFGMDVSHGAAGRSD
VPSIAAVVSSRKWPCISRYRASVRTQSSRVEMIDDLFKPLPPTKEDPKKDEGMIRELLED
FYQSTPRLKPQNIIIFRDGVGESQFNQVLNIELEAIMQACKFLEENWDPKFTVIVAQKIH
HTKFFQSNSPLNVPPGTIIDSKVCHPKNNDFYLCAQNGAIGTTRPTHYQVLLDQIGFSAD
QLQELVHSLSYVYQRSTSAISVVAPVCYAHLAAGQMAQFLKFDDMADATSSHSGGFGPAG
GFPQMPELKESVRSSMFFC
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggctagacgtgggtttggcactaatggccagaggatctctttactgactaaccatttc
aatgtgaaacttagcagcaacagtgatcacttttatcaatacaatgtggatttcttctat
gaagatgggagtcctgttgaggcaaaaggggttggtcgaaaagtactagacatggtccaa
aatatgtataattctgagataggtggtaaagggtttgcatatgatggtgaaaagacattg
tttacagtaggcccgtttccaggaacttctctcgagttccgagtattgttggagaatcgg
tcatcaaatagaactgtaagaggaggcagcccaaatggagaggaaaccaagcgatcaagg
cgtcaatctcaatcgaagtcatatactgtgaagataagatatgcaactaaaatcccgatt
caagtaatctttaatgcacttcaagggaaagattctgagcaatttagtgaagcagtaagg
gttctcgatgttcttctaaggcaacatgctgcaaaacaaggttgtcttctcgttcgacag
tgtttctttcacaacgacccaagaaacttcgtaagccttgggggcggggttgtggggtgc
aggggatttcattccagttttcgggccgctcaagctggattaactttgaatatggatgtt
tcaactacaatgatagtcagaccagggaaagtcgtggacttccttctagagaatcaaaat
gttcgaaccttgagggaagtcgactggattaaggctaaaagaacgctgaggagccttcgt
attaagagcttccctactaatcgtgagtataagattattgggctgagcgaaagaatatgt
ggagaacagaaatttatgttgaaccaaaagactgccaacggcacagctaattcaatcgag
ataacagtctatgaatattttgccaaatatcatcatattgaagttaaagactcttatgat
tatccatgcctagacgttgggaagccaaagcgacctatttacctcccacttgagttgtgc
gaattgatatccctacaaagatataccaaggcgttgtcaagtttacaaagagcttcactt
gttgagaaatctagacagaagcctcaagaacgaatgaaagccttgacggatgcattgggg
aaaagtaactaccatgctgatcctcttattaactcaaccggtatcacaatcagcacaaca
atcactgaagttgagggtcgtgttttggaacccccaaagttgaagtctggaaggggagga
gacttgtttcctcatggtgggcgatggaactttaagaacaaggtcataaactcttccttt
atggttgggtcaaatgcacgctgcaacattgccgcattaagcagagatctagtcaggtgc
tgtcgcgcaaaagggatggatcttgatgacccatatgaaataatcgaagagagtcctcag
tttaggcacgcttctgcccctgatcgtgtaggcaagatgtttgaagcgataagaaaagca
cttccaggctcacctttgtttcttctatgcattctccctgaacgaaagaattcagacatt
tatggtccgtggaagagaaaatgtctagtagactttgggatcgtcacacagtgcatggcg
cccacggctaggatcaatgaccagtatctgacaaacttgcttctaaagatcaatgccaag
atgggtggaataaactctatgctatccctcgagcatttgcggtctataccattggtgtca
gagaccccaaccataatctttggaatggacgtgtcccatggtgctgctggccgttctgat
gttccttcgattgcagctgttgttagctcgagaaaatggccatgcatttctcgctatagg
gcatctgttcgtacacagtcttcaagagttgagatgattgatgatctatttaaacctctt
cccccaacgaaagaggatccaaagaaagatgaaggaatgatcagggaacttctggaggac
ttctaccaaagtacccctaggttgaagccgcaaaatattattatttttagggatggggta
ggcgagtcacagtttaatcaggtgctcaatatcgagcttgaggcaataatgcaggcatgc
aagtttttagaagaaaattgggatccaaagttcacggtgattgtggcccagaaaattcat
cacacgaagttttttcaatccaactcgcccttaaatgttccaccaggaacaattattgat
agtaaagtttgtcacccgaagaacaatgacttttacttgtgtgctcaaaatggagcgatt
ggaaccacacgaccaactcattaccaagtacttctagatcagattggtttttccgccgat
cagttgcaagagcttgttcattccctgtcctatgtgtaccaaaggagcacctctgccata
tccgtagttgctccggtttgctatgctcatttagcagcagggcagatggctcagttcctt
aagtttgatgacatggcggacgctacatctagccatagtggtggttttggtcctgcaggt
ggtttcccacaaatgcccgagctcaaggaatccgtgcgcagttctatgttcttttgttga
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