Erigeron canadensis (horseweed): 122604025
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Entry
122604025 CDS
T07610
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related-like
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122604025
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122604025
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122604025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-RING_16
Prok-RING_4
zf-ANAPC11
zf_RING_Vps8
zf-HC5HC2H_2
U-box_ZFPL1
DUF4518
zf-RING_Vps41
VPS18_RING_C
zf_RING_Vps8_fungal
zf-Nse
Prok-RING_1
zf-C3H2C3
zf-C2H2_ZN292
Motif
Other DBs
NCBI-GeneID:
122604025
NCBI-ProteinID:
XP_043632846
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All DBs
Position
6:complement(43535716..43537991)
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AA seq
243 aa
AA seq
DB search
MSTDIEDIHDDYLNLSLPADIPDDLKDFLPQDEEGLTYQEAILQQASVYHSYQECGMSRA
VATDDARSNTSSCSSDEEDEDEDEIENESSRDESVLSQEAMDEAYARSLQELGEEFDEFF
ITEFNAESRHVETSTEQVSSSEASEDDIDPDNMRYEELLNLTETVGVESVGLSAARISQL
PISIYTSGIVSNNREENCVICQESFKFGKRVIKLPCSHLYHSKCIIQWLKLKKNCPICQK
EVT
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagatatagaagacatccatgatgattatctaaatcttagtttgccagctgat
atccccgatgacttgaaagactttttgccacaagacgaagaaggtcttacttaccaagaa
gctatcttgcaacaggcaagcgtctatcactcgtatcaagaatgtggcatgagtagggct
gtggctactgacgatgctcgcagcaatacctctagctgttcttcagatgaggaagatgag
gatgaggatgaaattgaaaatgaatcctcgagggatgaaagtgttctgtcacaagaagcc
atggatgaagcttatgctagatccttgcaggagttgggggaggaatttgatgagttcttc
ataacagaattcaacgcagaaagtcgtcatgtagaaacttctaccgaacaagtatccagt
tcagaggcaagcgaagacgacattgatccggataatatgagatacgaggaactactaaac
ctcactgaaactgttggtgtcgagagtgtaggattatcagcagcgcgcatttcccagtta
ccaatctctatttacacatcaggaattgtctccaacaacagggaagaaaactgcgtgata
tgtcaagaaagtttcaaatttgggaaacgtgtgatcaaattgccttgctcccatttgtat
cacagtaaatgcattattcaatggttaaagctcaagaagaactgccctatttgtcaaaag
gaggtgacgtga
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