KEGG   Erigeron canadensis (horseweed): 122604027
Entry
122604027         CDS       T07610                                 
Name
(RefSeq) cullin-3A-like
  KO
K03869  cullin 3
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122604027
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ecad04121]
    122604027
   03400 DNA repair and recombination proteins [BR:ecad03400]
    122604027
Ubiquitin system [BR:ecad04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     122604027
DNA repair and recombination proteins [BR:ecad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     122604027
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8
Other DBs
NCBI-GeneID: 122604027
NCBI-ProteinID: XP_043632849
LinkDB
Position
6:complement(32943892..32948351)
AA seq 733 aa
MSSQKKRNFQIEAFKHRVVVDPKYAEKTWKVLEHAIHEIYNHNASGLSFEELYRNAYNMV
LHKFGDKLYSGLVSTMTSHLKEIAAAVEASQGALFLEELNKKWMEHNKALQMIRDILMYM
DRTYIPSNHKTPVHELGLNLWRDHIIHSKNIQMRLKDTLLEIVERERGSEVINRGLMRNI
VKMLMDLGPSVYQEDFEKPFLDVSTNFYRGESQQFIECCDCGDYLKKAEKRLNEEIERVS
HYLDAKSEVKITNVVEKEMIESQMSRLVYMENSGLVNMIVDDKYEDMGRMYNLFRRVPNG
LTLIRDVMTSHIRETGKQLVTDPEKLKDPVDFVQRLLDEKDKHDKIINLAFNNDKTFQNA
LNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDAEIVLDKVMMLFRYLQEKDVFE
KYYKQHLAKRLLSSKSVSDDAERSLILKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYE
AMGPVLGDGPTLDVHVLTTGSWPTQSSTACNLPPEILAVCEKFRTYYLGTHNGRRLTWQT
NMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQAVEIPTMELKRCLQS
LACAKGKNVLRKEPMSKDISEDDDFFFNDKFSSKFYKVKIGMVVAQKESEPEKLETRQRV
EEDRKPQIEAAIVRIMKARRVLDHNNIVAEVTKQLQSRFLPNPVVIKKRIESLIEREFLE
RDREDRKLYRYLA
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgagttcacagaagaagaggaatttccagattgaagcgtttaagcatcgagttgttgtg
gatccgaaatatgcggagaaaacatggaaggttttagaacacgcgattcatgagatttat
aatcataacgccagtggccttagctttgaagagctttacagaaatgcgtacaacatggtc
ctgcacaaatttggagacaagttatactctggacttgtatcgaccatgacttcacattta
aaagaaatagcagcagcagttgaagcatctcaaggggctttgtttctagaagagttgaac
aaaaaatggatggaacacaacaaagcattgcaaatgataagagacatattaatgtacatg
gatagaacttacattccaagtaatcacaaaactccggttcatgagcttggcctgaactta
tggagagatcacattattcactccaaaaatatccaaatgaggttaaaagatacactcctg
gaaatcgtggagagggaaagaggcagtgaagttattaaccgaggtttaatgagaaacata
gtgaaaatgctaatggaccttggtccatctgtttaccaagaagactttgagaagccattt
cttgatgtctcaaccaacttttaccgtggggaatctcagcagtttattgaatgctgtgat
tgcggggattatctaaaaaaagctgagaaacgtttgaatgaagagattgaacgagtgtca
cactacttagatgctaagagtgaggtgaagataacaaatgtggtggagaaggagatgatt
gaaagtcaaatgagcagattagtttacatggagaactctggcttggttaatatgattgtg
gatgacaaatatgaagatatgggcaggatgtacaacttattccgtagggtacctaatggt
ctaacgttaatccgtgacgtgatgacttctcacattcgggaaactggtaaacaactggtg
actgatcccgaaaagttaaaagatcccgtggactttgtacaacgcctattggatgaaaaa
gataaacatgataaaatcattaatcttgcatttaacaacgataaaacgttccaaaatgct
ctaaattcttcgtttgaatattttattaatttgaacccccggtccccggaattcatctcc
ttgtttgttgatgacaagctcaggaaaggactgaaaggggttagtgaagaggatgcagag
atagtcttagacaaggtgatgatgctctttcgttatctacaggagaaagatgtatttgaa
aagtattacaagcaacatctggcaaaaaggcttctttcgagtaagagtgtgtctgatgac
gcagagagaagcttgatactgaagttgaaaacagaatgtgggtaccaatttacttcaaaa
ttggaaggtatgttcaccgacatgaagacttctcaggatacaatgcaaggtttctatgaa
gccatgggacctgtattaggcgatggacccacactcgatgtacatgttttaaccactggc
tcttggccgactcagtccagcaccgcgtgcaaccttcctcccgaaatcctagcagtttgt
gaaaagttcaggacgtattaccttgggacccacaatggacgtaggttaacatggcaaaca
aacatgggttctgcagatattaaagctacatttgggaaagggcagaaacacgagctaaac
gtttctacatatcaaatgtgtgttctgatgcttttcaacaatgcagatcggttgagttat
agagaaattgaacaggcggttgagattcccaccatggaattaaaaaggtgtttgcagtcc
ttggcttgtgcaaagggaaagaatgttttgaggaaagaaccaatgagcaaagatatcagt
gaagatgatgacttcttctttaatgataagttctcaagcaagttttataaagtgaagata
ggtatggtggtggcgcagaaggaatcagaacctgaaaagttagaaacgaggcagagggtg
gaggaagacagaaagcctcagatcgaagcggctattgttagaattatgaaagcgagacgg
gtgctggatcacaacaatattgtggctgaggttacaaaacaattacagtctagattccta
ccaaatccagtagttataaagaaaagaatcgagtctcttattgaaagggagttcttagag
agggacagagaagacagaaagttgtatcgatatttggcttga

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