KEGG   Erigeron canadensis (horseweed): 122604048
Entry
122604048         CDS       T07610                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
  KO
K14963  COMPASS component SWD3
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    122604048
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ecad03036]
    122604048
Chromosome and associated proteins [BR:ecad03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     122604048
    NSL complex
     122604048
   HMT complexes
    COMPASS/SET1 complex
     122604048
    COMPASS/SET1 complex (yeast)
     122604048
    MLL-HCF complex
     122604048
    MLL3/MLL4 complex
     122604048
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     122604048
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WDR55 WD40_Gbeta WD40_MABP1-WDR62_1st Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C NBCH_WD40 WDR90_beta-prop_4th CFAP251_N DSE1_N Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_DCAF4 ASA1 WD40_RFWD3 Beta-prop_NWD2_C Beta-prop_EIPR1 PAC11 Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_ACSF4 Beta-prop_HPS5 WD40_like Beta-prop_Nup120_160 Beta-prop_NOL10_N eIF2A Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 TRM82_WD Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 RMC1_N Beta-prop_WDR75_2nd SHKBP1_KCTD3_C Ge1_WD40 Tricorn_2nd PALB2_WD40 PROPPIN KNTC1_N Big_7 WD_LRWD1 WDR54 Cytochrom_D1 DUF8239 Beta-prop_WDR11_1st DUF5570
Other DBs
NCBI-GeneID: 122604048
NCBI-ProteinID: XP_043632877
LinkDB
Position
6:30628755..30633800
AA seq 323 aa
MTSQPKPPPETTTPIPHPYTLKHTLTGHKRSISAVKFSDDGTLIATSSADKTARTWSTTT
FTTIQQFIGHEQGISDVAFSSDSRFLATASDDKTVRLWDVSTGTLLKTLTGHTNYVFCVN
YNPQSNMIVSGSFDETVRVWDAKTGKCLKVLPAHSDPVTAVNFNRDGSLIVSSSYDGLCR
IWDASTGHCTKTLIDDDNPPVSFVKFSPNGKFILVGTLDSTLRLWNFSTGKFLKTYTGHT
NSKYCISSAFSITNGKYIVSGSEDNCVYLWELQTRKVVQKLEGHTDAVITVACHPNENMI
ASGALENDKTVKIWTQDVQKPER
NT seq 972 nt   +upstreamnt  +downstreamnt
atgacgtcacaaccaaaaccaccaccggaaacaaccacccctatcccccacccctacact
ctaaaacacaccctaaccggccacaaacgttcaatctccgccgtcaaattctccgacgac
ggaaccctcatcgcgacttcctccgccgacaaaaccgcccgtacctggtccaccacaacc
ttcaccaccatccaacaattcatcggccacgaacaaggtatctccgatgtcgcattctcc
tccgattctcgattcctcgcaaccgcctcagacgacaaaaccgtccgtctttgggacgtc
tccaccggtaccttacttaaaacactaaccggccacactaactatgttttttgtgtcaat
tataatcctcagtcaaacatgattgtgtcgggttctttcgatgagacagttagggtttgg
gatgcaaaaactgggaaatgtttgaaagttttacctgctcattctgacccagttaccgcg
gttaattttaaccgagacggtagtttgattgtttcgagtagctatgatgggttatgtagg
atttgggatgcttctactggtcattgtactaaaactttgattgatgatgataacccgcct
gttagtttcgttaagttttcgcctaatgggaaatttatccttgttgggactcttgatagt
actctgaggttatggaacttttcaaccggtaagttcttaaagacctacaccggccatacc
aactcaaagtactgcatctcatcagcattttccatcaccaatggcaaatacatcgtcagt
ggttctgaggacaattgtgtgtatttgtgggaacttcagacaagaaaagttgtccagaaa
ctcgaaggtcacactgatgctgtcataacggttgcatgtcacccaaatgagaacatgatt
gcttcaggggccctagaaaatgacaaaacagtaaaaatctggactcaagatgttcagaaa
ccagaaagataa

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