Erigeron canadensis (horseweed): 122604104
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Entry
122604104 CDS
T07610
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122604104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecad03009
]
122604104
Ribosome biogenesis [BR:
ecad03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
122604104
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
122604104
NCBI-ProteinID:
XP_043632944
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All DBs
Position
1:10453776..10458046
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AA seq
320 aa
AA seq
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MYFDYRYHGTSFEQTYRCYPASFIDKPQIENGDKIIMPPSALDRLASLHIDYPMLFELRN
TATERVSHCGVLEFIAEEGLIYMPYWMMENLLLKEGDTVRIKNVTLPKGTYVKLQPHTSD
FLSISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIESKPSGAITIIETDCEVDF
APPLDYKEPERPVASDPSSKAPAEEQAAPAEEPKFNAFTGSGRRLDGKPIKYQPPPVSSP
SGSKGKQPAVSSGAGQPSTGSTSQSTSRQSQGKLVFGSNASRGPAPHKQKEEPKEMKQEQ
PPKEEQKFQAFTGKKYSLKG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcgattacagatatcatggaacatcctttgaacaaacatatcggtgttaccct
gcctcttttattgacaagccccagatcgaaaatggtgataaaattataatgcctccttct
gctcttgatcggcttgcttcccttcacattgattatccaatgctgtttgagctgcgcaat
actgctactgagagagtttcacattgtggtgttctcgagttcattgctgaagaaggcttg
atatacatgccttattggatgatggaaaatctgcttttaaaagaaggagatactgtgcgc
ataaagaatgtgacccttccaaagggtacatacgtcaaattgcaaccacacacatcggac
tttttgagtatttcaaacccaaaagctatcttagagacaactttgaggaacttttcctgt
ttaactacaggagatagcattatggtggcgtataacaataaaaaatactacatagatatt
atcgaatcgaagccttctggtgcgataactattattgaaactgactgtgaagtagacttc
gctcctcctcttgattacaaggaaccagagaggcctgtggcttccgatccttcaagcaag
gcacctgccgaagagcaagcagctccagccgaggaaccaaaatttaatgcatttacagga
tcagggagaaggttggatggtaaacctataaagtaccagccaccacctgtatcctcccct
tccgggtccaaagggaagcaacctgcagtttctagtggagccgggcagccatccactggt
tctacttcacaaagcacctctcgccaatctcaaggaaaactagtctttggttctaatgcc
agccgcggtccagctcctcataagcaaaaggaagagcctaaagagatgaaacaagagcag
cccccgaaagaagaacagaagttccaagccttcacagggaagaaatactcactgaagggt
taa
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