Erigeron canadensis (horseweed): 122604148
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Entry
122604148 CDS
T07610
Name
(RefSeq) auxin response factor 16-like
KO
K14486
auxin response factor
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122604148
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Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
122604148
NCBI-ProteinID:
XP_043632981
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Position
6:39319853..39323472
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AA seq
634 aa
AA seq
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MINIMDHMIKPMNEMDKSLDGQLWHACAGGMVQMPEVNSKIFYFPQGHAEHAAGRDGGFR
DLPRIPPYILCGVSAVNFMADSDTDEVYARIRLTPLRNHKDCDFDNDGFLGFDHNNKSEN
QDKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGKLWKFR
HIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKRGTGRGFLDGN
SSGWNTAIAGVGGSGKVTADSVIEAAKLAATGRLFEVVYYPRASTPEFCVKASTVKAAMR
IQWCPGMRFKMAFETEDSSRISWFMGTISSVDVDDQIRWPNSPWRLLQVAWDEPDLLQNV
KRVNPWLVELVSNMPSIHLSPFSPPRKKLRIPQPPDFPLLSIPSFVTNQIPASIQGARQN
PQFGFDHHLLQHHQYLSKIQSFPFGSPRIPPRFMETVQETEENVSCLLTIGNNSDNSKSS
SRDEKKPNFVLFGQPIFTEQQLSDSSSGETVANQSDSSVFVQNGQVESSSDEAGPWRKDQ
RSEFGLKTGHCKIFMESEDVGRTLDLAAFRSYEDLDRKLADMFSVEKSVMLNNLIYRTTS
GSLKHTRDEPFSEFSKTAQRLTIVIDSGSDNVRA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgattaatataatggatcatatgattaaaccaatgaatgaaatggataaaagcttggat
gggcagttatggcatgcttgtgcaggtggtatggtacaaatgcctgaagtaaactctaaa
atattttattttcctcaaggtcatgccgaacatgctgcaggaagggatggcggttttcga
gaccttccaagaatccctccttacattctttgcggggtatccgccgtgaatttcatggcg
gattccgacacagatgaagtttatgcaagaataagactaacccctttaagaaatcacaaa
gattgtgattttgataatgatggttttttaggatttgatcataataacaagagtgaaaac
caagataaaccggcttcattcgcaaagacattgactcagtctgatgctaataatgggggt
gggttttcagttccaagatattgtgctgaaactatctttccaagattggattacactgct
gaaccaccagtgcaaaccattttggcaaaagatgttcatgggaagttatggaaatttagg
catatatatcgagggacgcctcgcaggcatcttttgacaaccggttggagcaactttgtt
aaccaaaagaagcttgtagctggtgactcgattgtgttcttgagggcggataatggggat
ctttgtgtaggtattcggagggccaagagggggaccggaaggggatttcttgatgggaat
tcttctgggtggaatactgcaattgctggagttgggggttcggggaaagtaactgcagat
tcggtgattgaagctgcaaaactagcggctacaggacggctgtttgaggtggtgtattac
cctcgagctagcacaccggagttttgtgttaaagcctcgactgtaaaggctgcaatgcgg
atccaatggtgtccagggatgaggtttaagatggcgtttgagacagaagattcgtcgcgg
ataagttggtttatgggcacgatttcttcagttgacgttgatgatcaaatccgttggcct
aattcaccatggaggctacttcaggtagcgtgggatgaacctgatttgctacaaaatgtg
aaacgagttaacccgtggttagttgaattggtgtcgaatatgccatcaattcatctttca
ccattttcgcctccaagaaagaagcttcggatccctcaaccacccgattttcctcttctt
tcaatcccatcatttgtcacaaaccaaattcctgcaagcatccagggagccaggcaaaat
ccgcaatttggatttgatcaccatcttcttcaacatcatcagtacctaagcaagatccaa
tcttttccatttgggtcaccaagaattcccccaagatttatggaaacagtccaagaaact
gaagaaaacgtttcttgtttgctaacgatagggaacaacagtgataactcgaaatcaagc
tcaagagatgaaaaaaaaccaaactttgtgttgtttggtcaaccaatttttacagaacaa
cagctctcggacagtagttctggtgagacagtggctaaccaatccgatagttcagtcttc
gttcagaatggccaagtcgagagctcatcagatgaagcgggcccatggcgcaaggaccaa
aggtctgagtttggtctcaagacgggccattgcaagattttcatggagtcagaagatgtg
ggtcggactttagacctggctgcttttcgttcatatgaagatttggacagaaagctcgcc
gacatgttcagtgtagagaaatctgtaatgcttaacaacttgatttaccgtaccacatct
ggttcactaaaacatacaagagatgaacccttcagtgagttctcaaagacagcacaaagg
ctaaccattgtgattgattcgggcagtgacaatgtaagggcttaa
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