Erigeron canadensis (horseweed): 122604220
Help
Entry
122604220 CDS
T07610
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 4
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecad01009
]
122604220
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122604220
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
122604220
Protein phosphatases and associated proteins [BR:
ecad01009
]
HAD phosphatases
Fcp/Scp phosphatases
122604220
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122604220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
122604220
NCBI-ProteinID:
XP_043633050
LinkDB
All DBs
Position
1:complement(39559696..39562483)
Genome browser
AA seq
359 aa
AA seq
DB search
MCIKCGEKMENQSGVAFGYIHKDLRLANDEIARLRERDLKNLLRHKKLYLVLDLDHTLLN
TTHVKTLTIKERYIKNLNDPMQDALRGSLFKPFTHMLTKLRPFVHTFLKEASNLFDMYIY
TMGERAYALKMADLLDPDMVYFNSKVIAKNDCTQRHQKGLDVLAGQESAVLILDDTEQVW
KKHTENLILMERYHFFASSRKQFACKSKSFSHKRSDESDVDGALANVLKVLKRVHSMFFD
PELGDDFAGRDTRQMLRAVRSEILKGCIVVFDGEFVTNDQAEIHELWPLAERLGATSLTE
VGPSVTHVISTNVGTEKSRWAIREQKFLVKPKWLKAASFRWQRQPEKKFRVKKAKMKLK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtgcataaagtgcggagagaagatggaaaatcagtcaggtgtcgcatttgggtatata
cacaaggatctgagacttgctaatgatgaaattgcccgactgcgtgaaagagatctaaag
aacttgttacgtcataaaaagctttacttggttcttgatttagaccacaccttactaaac
acaacccatgtaaaaactttaactataaaagaacgatacataaagaacctgaatgatcca
atgcaagatgccctgagaggcagtctatttaaaccgtttactcacatgttaacaaagttg
aggcccttcgttcacactttcctgaaagaagctagcaatctgtttgatatgtacatttac
acgatgggtgagcgtgcttatgcattaaaaatggcagacctgcttgaccctgatatggtt
tactttaactctaaagtcattgcaaaaaatgattgcacccaaagacatcaaaaaggcctt
gatgtgctagcaggccaagaaagtgctgttttgatccttgatgatactgaacaagtatgg
aagaagcacacagaaaacttgatattgatggaaaggtatcatttctttgcctcgagccgt
aaacaatttgcctgcaaatctaaatctttttctcataagagaagtgatgagagtgatgtt
gacggcgctcttgccaatgttcttaaagtgcttaaacgagtccacagtatgttttttgac
ccggaacttggggatgattttgcaggccgagatacaagacagatgctacgtgcagttcgt
agtgaaatattgaaggggtgtatagttgtgttcgatggtgagtttgtaacaaatgaccag
gccgaaatccatgagctatggccgctggcagagagattaggtgcaacaagcttgactgag
gttggcccatcagtgacacatgtcatttccacaaatgttggaactgagaagtcacgttgg
gcgattcgagaacagaagtttttggttaaaccaaagtggttaaaagctgcaagtttccga
tggcagaggcaacctgagaaaaagtttcgtgttaaaaaagcgaaaatgaaactaaaataa
DBGET
integrated database retrieval system
