Erigeron canadensis (horseweed): 122604273
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Entry
122604273 CDS
T07610
Name
(RefSeq) uncharacterized protein LOC122604273
KO
K14961
COMPASS component SWD1
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecad03036
]
122604273
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
122604273
COMPASS/SET1 complex (yeast)
122604273
MLL-HCF complex
122604273
MLL3/MLL4 complex
122604273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_IFT140_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR35_TULP_N
FAM177
Beta-prop_WDR11_1st
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
122604273
NCBI-ProteinID:
XP_043633096
LinkDB
All DBs
Position
6:24299525..24309560
Genome browser
AA seq
990 aa
AA seq
DB search
MNPSITDSLYSGYPEVIEGCLKHGIMKCIAFNRRGTFLAAGCSDGSCVIWDFMTRGIAKE
LRDDDCDAAIINVCWSRSGHHILVSADDKSLTLWNVIKGEKVFQTILQQTPLHASLHPGG
RGLSPPSLCLVSPFSSAPLILNFHTKTTTLLPTLLSDSGTGLAMPSCNNFSDGSTHYTPT
AACFNKYGDLVYLGNSIGEILIIDHKTNKVCGIFPIPGGAVIKNITFSRNGQYLLTNSGD
RTSRIYKNLLPLKDSHKIFGVNETNDTVSEIEKLKAVGLKCLSLFQEFQDSITKMHWKAV
CFSGNSEFVVGACASKGEHKLYIWDKSGLLVQILEGPKAAIVDLAWHPVRPIVVSVSVMG
LAYVWAKDYTESWSAFAPDFKQLEENEEYVEQEDEFDLMPENKKVKESALYEDEVDITTV
EKDSLFSDSDISDDELYFLQSEPCLDFPVLPVSQEGTRVNGQEMTNHDSNQVEALENSGA
EDTGRTRVKRWKPSQKLLELQAFEITQNTKASENARGEDTGRTHVKRSRKSKKLLELQEA
TQNTKASECAVQSFPTLDGDESMRELNEVKPPNKGKLYSDVWNSFKKVKKSNGQIVAVCK
HCSIVLSGDGGTSHLRYHIKKKHAEHVVSVDCSNVEGVSTPDVVECMTGFEEVNPSVQGK
FKSIIWNHFKKIRKSNNRIVAVCNHCSKKVVAGDVRNRNMKNHLRKKHAGLVSANGSNME
IVPIPNDGEPITGVEEANPSTQGMLTSMVWNHFERVKKSDSKIVAVCNHCSLNLVAGDAG
TSSLRNHLKRKHAELIVSADCSNSENVVTPYGDEPIAGNKKVKRSKQGMLKSMVWNHFKR
VTKSNNRSVAVCNHCSINFSGDKGTTHLRYHLEKKHAELIVSADCSNMEILPTSNGDVAH
GEVIISTDGNHMECNSTESDESTEYEEVNIPNRRKITSVVWKYFKKVKKRNGDKVFAVCN
FCNAHFASGGAGTNHLRNHLKRKHIELSVS
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgaatccctcaattacagattcgttgtattcgggttacccggaggtgatcgaggggtgt
ttgaaacacggtatcatgaaatgcattgcgtttaatcgccgcggaacttttctcgcagct
ggatgctctgatggcagttgtgttatatgggacttcatgaccagaggaattgctaaagaa
cttagggatgatgactgtgacgctgcaattatcaatgtttgctggtcaagaagtggtcat
cacatactcgtttccgctgatgacaagtctttgactctttggaatgttataaagggcgaa
aaagtctttcaaacaatactgcaacaaacccctctacatgccagcctgcatcctggtggc
cgtggtctctcaccgccatctctttgcctagtttctcctttctcttctgctcctttgata
cttaatttccataccaaaaccacaactttacttccaacattactttctgatagtggcaca
ggacttgccatgccatcatgcaacaatttttcagatggatccactcattacacacctact
gcagcatgctttaataagtatggagatctagtatatttgggaaattccataggggaaata
ctcataatcgatcacaaaacaaataaagtttgtggcatttttcctatcccgggtggtgca
gtgataaagaatataacattcagcaggaatggccagtaccttcttacaaattctggtgat
cgcacaagtaggatatacaaaaaccttttgcccttaaaagattcacataaaatctttgga
gtaaatgaaaccaatgacactgttagtgaaattgaaaagctaaaggctgttggattgaag
tgtttatcgctttttcaggaatttcaagattctatcacaaaaatgcattggaaagcagtg
tgttttagtggcaatagtgagttcgttgttggtgcctgtgctagtaaaggggaacataaa
ttgtacatatgggataagtctgggcttcttgtgcaaattcttgaaggtccaaaggcagct
atagtggatttggcttggcaccctgtccgtcctattgttgtttctgtgtcagtaatgggc
ttagcttacgtttgggccaaagactacacggagagttggagtgcttttgctccagatttt
aagcaacttgaagaaaatgaagagtatgtggaacaagaggacgagtttgatttgatgcct
gaaaataaaaaggtgaaagaatcagccctatatgaagatgaagttgatattacaacagtg
gagaaggactccctatttagtgattcagatatatccgatgatgaattatacttcttgcaa
tcagagccttgccttgattttcctgtcctcccagtttcacaagaagggacaagagtgaat
ggtcaggagatgacgaaccatgattcaaatcaagttgaagctctagagaattccggggct
gaagacacagggagaacacgagtgaaaagatggaagccatcacagaagttgttggaactg
caggctttcgagattacacagaatacaaaagcatcagagaatgcccggggtgaagacaca
ggtagaacacatgtgaaaagaagtcgaaaatcaaagaagttgttggaactacaggaggct
acacagaatacaaaagcatcagagtgtgctgttcagagttttccaactctagatggtgat
gagtccatgagagaattaaatgaagttaaacccccaaacaaaggaaagttatattctgac
gtttggaattcgttcaaaaaagtgaagaaatcaaatgggcaaattgtcgcggtttgtaag
cattgtagtatagttcttagtggagacggcggaactagtcatttgcggtaccatataaag
aaaaaacatgcagagcatgttgtttctgtagattgcagcaatgtggagggtgtttcaact
ccagatgttgttgagtgcatgacaggatttgaggaagttaatccttcagttcaaggaaag
ttcaaatctataatttggaatcatttcaaaaaaattaggaaatcgaacaacagaattgtt
gccgtgtgtaaccattgtagtaagaaagttgttgctggagatgttagaaatagaaatatg
aagaaccatcttcggaaaaaacatgcaggactcgtttctgcaaatggtagcaatatggag
attgttccaattccaaatgatggcgagcccattacaggagttgaggaagctaatccttcg
actcaaggaatgttaacatctatggtctggaatcatttcgaaagagtcaagaaatctgac
agcaaaattgttgcggtctgtaaccattgtagtttaaaccttgttgctggagatgctgga
actagtagtttgaggaaccatctcaagagaaaacacgctgaacttattgtttctgcagat
tgtagcaatagtgagaatgttgtaacaccatatggtgatgagcccattgcaggaaataag
aaagttaagcgttcgaagcaaggaatgttaaaatctatggtctggaatcatttcaaaaga
gtcactaaatcaaacaacagatcggttgctgtttgtaatcattgtagtataaactttagt
ggagataagggaactacgcatctgaggtaccacctagagaaaaaacatgcagaactcatt
gtttctgctgactgtagcaatatggagattcttccaacttcaaatggtgatgtggcacat
ggtgaagtcattatttctacagacggtaatcatatggagtgtaattcaactgaaagtgat
gagtccacagaatatgaggaagttaatatcccgaatcgaagaaagataacatccgtggtt
tggaagtattttaaaaaagtaaagaagcgaaatggcgataaagtatttgccgtttgtaac
ttttgcaatgcacactttgcttctggaggtgcaggaactaatcatctgaggaaccatctc
aaaagaaaacatatagagctgtctgtttcttga
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