Erigeron canadensis (horseweed): 122604399
Help
Entry
122604399 CDS
T07610
Name
(RefSeq) GTPase LSG1-2
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122604399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecad03009
]
122604399
Ribosome biogenesis [BR:
ecad03009
]
Eukaryotic type
Pre-60S particles
GTPases
122604399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
122604399
NCBI-ProteinID:
XP_043633229
LinkDB
All DBs
Position
6:9803874..9810737
Genome browser
AA seq
577 aa
AA seq
DB search
MGKNDKSGLGRALVKHHNHMIQESKEKGQLYYKQHKKVLESVTDVADIDAVIQQADEAVR
LFSADNPTAATSLIDLESGSSMPEMTPEERREHQKQEEALHASSLSVPRRPPWNAKMSVE
ELDANERRAFLIWRRNLARLEENDSLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDARDP
LFYRCPDLEAYAREIDEHKQTLLLINKADLLPYSVRLKWAEYFRLHGILYLFWSAKAATA
ELEGKKIASLDEIVNDDTKIHGREELLSRLQSEAENIVLRRTNSRSSHMDHQEKSADHVT
VGFVGYPNVGKSSTINALVGAKRTGVTSTPGKTKHFQTLIITEKLTLCDCPGLVFPSFTS
SRYEMIASGVLPIHRMTEHREAVQVVADRVPRNVIEGVYNIKLPKPKPYEPQNRPPSASE
LLRSYCASRGYVASSGLPDETKAARFILKDYIDGKLPHYEMPPGTSDVEANLRDALSDDS
ESDESNSVVETTEEQGGVRLDDVMDDLKSFDLANGLGPSKGVPGARIKVASTASYKQHKK
PQRKKDRAWRVKDDGSDGMPVVRVYQKPANTGPVTAI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaatgataaatcagggttgggaagagctttagtaaaacatcacaaccatatg
atacaagaatcaaaagaaaaaggtcagctttattataaacaacacaaaaaagtcctcgaa
tccgttactgatgtcgccgatattgacgccgttatccaacaagccgacgaggctgtccgt
ctcttctctgccgacaaccccaccgccgccacttcccttattgatttagagtcgggttct
agcatgcctgaaatgactccggaggaaaggcgagagcatcaaaagcaagaagaagcccta
catgctagcagtcttagtgttccacggagaccaccatggaatgccaaaatgtcggttgaa
gagctcgatgcgaatgaaaggcgtgcttttttaatatggcggcgtaatcttgcaaggctt
gaggagaatgatagtcttgttctgacaccatttgagaagaatctggatatttggaggcag
ctttggagggttgttgaacgtagtgatctgcttgtcatggttgttgatgcacgagatccg
ctgttctatcggtgtccagatcttgaggcatatgcaagagaaatagatgagcataaacag
acgttacttctgattaacaaggcagatcttttaccatattctgtaagacttaaatgggct
gaatacttccgacttcatggtattctctacttgttttggtctgccaaggctgcaacagcg
gaattggaagggaaaaaaatcgcttctttggacgaaattgttaatgatgatacgaaaata
catgggagggaagagctattatctcgtttacaatcagaagcagagaatatagtcctaagg
agaaccaactcacggtctagtcatatggatcatcaagaaaaatcagctgatcatgtaacc
gtgggatttgttgggtaccctaatgtcggaaaaagttcaacaatcaatgctttagttggt
gcaaaacggacgggtgtaacctctactcctggaaaaaccaagcattttcagacacttata
attaccgaaaagcttactctctgtgattgtcctggattagtgtttccttctttcacaagc
tcgagatatgaaatgattgcatctggggttttaccaattcaccgaatgaccgagcaccgg
gaagcagtacaagtggtagcagatcgggtacctcgaaatgtcattgagggtgtctataac
atcaaactaccgaaaccaaagccatatgagccgcagaaccgtcctccttcggcatcagaa
cttttgaggtcatattgtgcgtcccgtggctatgttgcctcaagtggactgcctgatgag
acaaaagctgcacgttttatcttgaaggattatatagacggaaaactgcctcattatgag
atgccacctggcacgtcagatgtagaagctaatttgagagatgcgctatctgacgatagt
gaaagtgatgaatcaaattccgttgttgaaactactgaagagcaaggcggggtgaggcta
gatgatgtcatggatgacctcaaatcttttgacttggcaaatggtttaggtccaagtaaa
ggggttcctggtgctaggataaaagttgcttccactgcatcttataaacaacacaaaaag
cctcaaaggaagaaggaccgagcatggagagtcaaggatgatgggagtgacgggatgccg
gtggtaagggtgtatcagaaaccggccaacacaggacctgtcacggctatttaa
DBGET
integrated database retrieval system
