Erigeron canadensis (horseweed): 122604536
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Entry
122604536 CDS
T07610
Name
(RefSeq) LOW QUALITY PROTEIN: apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03013
Nucleocytoplasmic transport
ecad03015
mRNA surveillance pathway
ecad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122604536
09122 Translation
03013 Nucleocytoplasmic transport
122604536
03015 mRNA surveillance pathway
122604536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122604536
03041 Spliceosome [BR:
ecad03041
]
122604536
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122604536
Spliceosome [BR:
ecad03041
]
Complex C
Other components
EJC/TREX
122604536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
122604536
NCBI-ProteinID:
XP_043633358
LinkDB
All DBs
Position
6:25103372..25106906
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AA seq
517 aa
AA seq
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MTEIKNTDVGLNQENGEPKPQQQSPEELPELGSSDLISGNQVDEVSQVQSDSNSIDTITN
IEKNEIKDNVIDDDVKLEIDVKPETILDRNNSESVEVDEQHEDKPAVEEKDANIVNSTDI
HNEKDDVIADDVELDAKVEELQPLTESTGVDEPVKENLNTENVDICKKNDSGDVGSPEKL
NLDGDDSMEEDILESKQIDSKFSSDEVGDKSEKIGVKEDGSVHGMVEDENADKSFAAGED
KMEPSVPSTKRKPYDHEGSENSEVVKRQRRWNSESLKVPEQVLPNHSASATPKDAFQTLA
KRTFSRSESIVSQDSPKERIVPPTSNPPTTSLRINHFLRPFTLKAVQELLGQTGTVVSFW
MDQIKTHCYVTYASVEEAIETRNAVCNLQWPAYGGRLLMADFVDPQEVKNRVDPPPPSSE
PPITTIPPATTKQPPQPSPRQKQQLPPPPTLPPPPPLSNAPLARARVPPAPEKIDPPIVT
LDDLFKKTRATPRIYYLPLSDEQVAAKLNAQGKPVKH
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaatcaagaacacggatgtgggtctgaatcaagagaatggggagccaaagcct
caacaacaatctcctgaagaactgcctgagcttggctcatcagatctcattagtggcaac
caggtagatgaggtcagccaagtacaatctgattctaattctattgatactatcacaaat
attgaaaagaatgaaataaaagataatgtaattgatgatgatgtcaaattagagatagat
gttaagcctgagacgatcctagatcgtaacaattcagaatcggtcgaagttgatgagcaa
catgaggacaagcctgccgtggaagagaaagatgccaatattgttaacagcacagatatt
cacaacgagaaagatgatgtaattgctgatgatgtcgagctggatgctaaggttgaggag
ctgcagccattaacagaatcaactggagttgatgagccagtcaaggaaaatctcaatact
gaaaatgtagatatttgcaagaaaaatgacagtggagatgtgggatctccggaaaagctg
aatttggatggtgatgattcaatggaggaagatatcctagagagtaagcaaattgattca
aagttcagttctgatgaagtgggagacaaaagtgagaaaattggagtaaaagaagatggt
tctgtgcatggtatggtggaggatgaaaatgctgataagagctttgctgcaggtgaagat
aaaatggagcctagtgtgccttccacaaaaagaaagccttatgatcatgaaggttcagaa
aacagcgaagtggtgaaaaggcagcgcagatggaattctgaaagtctcaaggtgcctgaa
caagtattacctaaccattctgcctctgctacacctaaggatgcatttcagactcttgcg
aaacgcaccttttcaagatccgagtctatagttagtcaagattcgcccaaggaacgcatt
gttccccctacatcgaatcctccaactacatctcttcgaattaatcattttctgcgtcct
ttcacgttaaaggccgtgcaagaacttcttggccaaacgggtacagttgttagtttttgg
atggatcagatcaaaactcactgctatgttacatatgcatctgtggaagaagctatagag
acacgaaatgctgtatgcaacctacaatggcctgcgtatggtggacgtcttctgatggct
gactttgtggatccacaagaggttaagaatcgggttgacccacctccaccttcttcggaa
cctcctatcaccactatacctccagccaccaccaagcagccaccacagccctcacccaga
cagaaacaacagctccctcccccacccacccttccaccgccgccaccattgtccaatgca
ccactagcaagagcccgtgtgcctcctgctcccgagaaaattgatcctccaattgttaca
ttggatgatctgtttaaaaagacgagagccactcctcgtatctactacttaccgctttct
gatgaacaagttgcagcaaagctgaatgctcaggggaaacctgtgaagcattag
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