Erigeron canadensis (horseweed): 122604550
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Entry
122604550 CDS
T07610
Name
(RefSeq) ribulose bisphosphate carboxylase small subunit, chloroplastic 3-like
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00630
Glyoxylate and dicarboxylate metabolism
ecad00710
Carbon fixation by Calvin cycle
ecad01100
Metabolic pathways
ecad01110
Biosynthesis of secondary metabolites
ecad01200
Carbon metabolism
Module
ecad_M00165
Reductive pentose phosphate cycle (Calvin cycle)
ecad_M00532
Photorespiration
ecad_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
122604550
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
122604550
Enzymes [BR:
ecad01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
122604550
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Motif
Pfam:
RuBisCO_small
CSS_CxxC
Motif
Other DBs
NCBI-GeneID:
122604550
NCBI-ProteinID:
XP_043633369
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All DBs
Position
6:24717987..24718809
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AA seq
169 aa
AA seq
DB search
MSATTFTAAVTGPIYMGLSPNGSKLFQTTNSLPWSKKTVSNGSRVNCMKVWNPINNKKFE
TLSYLPPLTDESIAKEIDYMIRKGWIPCLEFDSVGYVYRENSRIPNYYDGRYWTLWKLPM
FGCTDASQVLNEIQECKTAYPNAYIRCLAFDNVRQAQCMSFVIQKPTAP
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaacaacattcacagctgcagtcactggacctatttacatgggtttgagccca
aatgggtccaagcttttccagactacaaactcactgccttggagcaagaaaacggtctca
aacggctctagggttaactgcatgaaggtttggaatccaatcaataacaagaagtttgag
actctttcgtatctcccacctctcacagatgaatccattgcaaaggagattgattacatg
ataaggaaaggatggataccgtgtcttgaatttgactcggtgggatatgtatacagagag
aacagccgaataccgaattactacgatggaaggtattggacattgtggaagctacccatg
tttggttgcactgatgcctcacaagttttgaatgaaatccaggaatgcaagacagcatac
ccaaatgcatatataaggtgtttggcatttgacaatgtgaggcaggctcaatgcatgtct
tttgttattcagaaacctactgccccttga
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